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Generate XDS.INP: Difference between revisions
→The script: add OLDMAR detector type
m (→The script: update v.89 notes) |
(→The script: add OLDMAR detector type) |
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# revision 0.88 . KD 16/10/2019 fixes for SSRF, add "-maxdepth 1" to "find -H ..." | # revision 0.88 . KD 16/10/2019 fixes for SSRF, add "-maxdepth 1" to "find -H ..." | ||
# revision 0.89 . KD 21/10/2019 add ADSC S/N 905 at ALS 8.2.1, S/N 928 at Australian Synchrotron MX2 beamline; final SSRF fixes | # revision 0.89 . KD 21/10/2019 add ADSC S/N 905 at ALS 8.2.1, S/N 928 at Australian Synchrotron MX2 beamline; final SSRF fixes | ||
REVISION="0. | # revision 0.90 . KD 25/10/2019 add OLDMAR detector type. Tested w/ SBGrid data set 6. Anomalous signal may have wrong hand! | ||
REVISION="0.90 (25-Oct-2019)" | |||
# | # | ||
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grep -q mar345 tmp2 && DET=MAR345 | grep -q mar345 tmp2 && DET=MAR345 | ||
grep -q BRUKER tmp2 && grep -q CBF tmp2 && DET=Bruker-cbf | grep -q BRUKER tmp2 && grep -q CBF tmp2 && DET=Bruker-cbf | ||
grep -q CMOS1 tmp2 && DET=adsc-CMOS1 | grep -q CMOS1 tmp2 && DET=adsc-CMOS1 | ||
grep -q MARCONTROL tmp2 && DET=OLDMAR | |||
else | else | ||
h5dump -d "/entry/instrument/detector/description" $FIRSTFRAME | grep -i Eiger > /dev/null && DET=eiger | h5dump -d "/entry/instrument/detector/description" $FIRSTFRAME | grep -i Eiger > /dev/null && DET=eiger | ||
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X_RAY_WAVELENGTH=`grep 'WAVELENGTH' tmp2 | awk '{print $2}'` | X_RAY_WAVELENGTH=`grep 'WAVELENGTH' tmp2 | awk '{print $2}'` | ||
OSCILLATION_RANGE=`grep 'PHI' tmp2 | awk '{print $5-$3}'` | OSCILLATION_RANGE=`grep 'PHI' tmp2 | awk '{print $5-$3}'` | ||
TRUSTED_REGION="0 0.99" | TRUSTED_REGION="0 0.99" | ||
elif [ "$DET" == "OLDMAR" ]; then | |||
echo "Data from old type MAR image plate detector" | |||
DETECTOR="MAR MINIMUM_VALID_PIXEL_VALUE=0 OVERLOAD=130000" | |||
NX=`awk 'NR==2 {print $2}' tmp2` | |||
NY=$NX | |||
QX=`awk 'NR==2 {print $15}' tmp2` | |||
QY=$QX | |||
ORGX=`awk 'NR==2 {print $19}' tmp2` | |||
ORGY=`awk 'NR==2 {print $20}' tmp2` | |||
DETECTOR_DISTANCE=`awk 'NR==2 {print $22}' tmp2` | |||
X_RAY_WAVELENGTH=`awk 'NR==2 {print $21}' tmp2` | |||
OSCILLATION_RANGE=`awk 'NR==2 {print $24-$23}' tmp2` | |||
TRUSTED_REGION="0 0.99" | |||
rotation_axis="0 1 0" | |||
echo unsure if sign of anomalous signal is correct - please verify or try both hands! | |||
elif [ "$DET" == "Bruker-cbf" ]; then | elif [ "$DET" == "Bruker-cbf" ]; then | ||