5
edits
Changes
→autoProcess
script in use at SSRL (Stanford) . See [A Quick XDS Tutorial for SSRL http://smb.slac.stanford.edu/facilities/software/xds/]. Download: http://smb.slac.stanford.edu/templates/xds/autoxds ; download http://smb.slac.stanford.edu/templates/xds/mccd_xdsparams.pl , too!
script in use at SSRL (Stanford) . See [A Quick XDS Tutorial for SSRL http://smb.slac.stanford.edu/facilities/software/xds/]. Download: http://smb.slac.stanford.edu/templates/xds/autoxds ; download http://smb.slac.stanford.edu/templates/xds/mccd_xdsparams.pl , too!
== autoXDS ==
== AutoProcess ==
Pipeline developed by Michel Fodje at Canadian Macromolecular Crystallography Facility (Saskatoon).
Usage:
autoprocess [options] /path/to/set1.img /path/to/set2.img ... /path/to/setn.img
options:
--mad, -m : Process each set, scale together and generate separate reflection files.
--screen, -s : Process a few frames from characterize crystal from each set.
--anom, -a : Process with Friedel's law False
--backup, -b : Backup previous output directory if it exists
--prefix=p1,p2,p3 : comma separated list of prefixes to use for output files.
Default is first part of image name
prefix order should correspond to the order of the data sets
for example for MAD data, use --prefix=peak,infl,remo
--dir=/path : Directory to store processed results. Default is to create a new one in the current directory.
--inputs, -i: generate XDS.INP only and quit
--help, -h : display this message
Default (no option): Process each set, scale together and merge into one reflection file.
Data sets:
Each data set can be represented by any frame from that set.
== xdsme ==
== xdsme ==