Generate XDS.INP: Difference between revisions

Jump to navigation Jump to search
m
→‎The script: improve wording
m (→‎The script: improve wording)
(2 intermediate revisions by the same user not shown)
Line 123: Line 123:
# revision 1.04 . Zhipu Luo 13/08/2021 extract ORGX,ORGY for electron diffraction from SMV header if the wavelength value starts with 0.0  
# revision 1.04 . Zhipu Luo 13/08/2021 extract ORGX,ORGY for electron diffraction from SMV header if the wavelength value starts with 0.0  
# revision 1.05 . KD specialcase extraction of number of images for BNL detectors E-32-0101 and E-18-0104
# revision 1.05 . KD specialcase extraction of number of images for BNL detectors E-32-0101 and E-18-0104
REVISION="1.05 (14-OCT-2021)"
# revision 1.06 . KD fix URLs in output. Availability of Apple M1 processor dectris-neggia-Apple-arm64.so . LC_ALL=C .
REVISION="1.06 (15-OCT-2021)"


#                                                                                                             
#                                                                                                             
Line 147: Line 148:
   exit                                                                                                           
   exit                                                                                                           
fi                                                                                                               
fi                                                                                                               
# make sure the locale does not interfere with e.g. awk calculations:
LC_ALL="C";export LC_ALL
#                                                                                                                 
#                                                                                                                 
# defaults:                                                                                                       
# defaults:                                                                                                       
Line 985: Line 988:
     if [ -e /usr/local/lib64/dectris-neggia.so ]; then
     if [ -e /usr/local/lib64/dectris-neggia.so ]; then
       echo LIB=/usr/local/lib64/dectris-neggia.so >> XDS.INP
       echo LIB=/usr/local/lib64/dectris-neggia.so >> XDS.INP
       echo LIB= line was written to XDS.INP
       echo LIB= line was written to XDS.INP . For Apple ARM64 processors, you must modify the name.
     else
     else
       echo !LIB=/usr/local/lib64/dectris-neggia.so >> XDS.INP
       echo !LIB=/usr/local/lib64/dectris-neggia.so >> XDS.INP
Line 1,191: Line 1,194:
fi
fi
echo XDS.INP is ready for use. The file has only the most important keywords.
echo XDS.INP is ready for use. The file has only the most important keywords.
echo Full documentation, including complete detector templates, is at
echo Full documentation, including complete detector templates, at xds.mr.mpg.de .
echo http://www.mpimf-heidelberg.mpg.de/~kabsch/xds . More documentation in XDSwiki
echo More documentation in strucbio.biologie.uni-konstanz.de/xdswiki/index.php .
echo After running xds, inspect, using XDS-Viewer, at least the beamstop mask in
echo After running xds, inspect at least the agreement of predicted and observed  
echo BKGPIX.cbf, and the agreement of predicted and observed spots in FRAME.cbf!
echo spots in FRAME.cbf!
rm -f tmp1 tmp2
rm -f tmp1 tmp2


2,651

edits

Cookies help us deliver our services. By using our services, you agree to our use of cookies.

Navigation menu