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1,812 bytes added ,  13:20, 13 August 2021
→‎The script: rev 1.04 (Zhipu Luo)
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# revision 1.02 . KD 11/01/2021 recognize mar555 detector as mar345 (thanks to Thomas Hauß, HZB)  
 
# revision 1.02 . KD 11/01/2021 recognize mar555 detector as mar345 (thanks to Thomas Hauß, HZB)  
 
# revision 1.03 . Feng YU 18/7/2021 fix/expand information about Shanghai Synchrotron Radiation Facility (SSRF)
 
# revision 1.03 . Feng YU 18/7/2021 fix/expand information about Shanghai Synchrotron Radiation Facility (SSRF)
REVISION="1.03 (22-Jul-2021)"
+
# revision 1.04 . Zhipu Luo 13/08/2021 extract ORGX,ORGY for electron diffraction if the image header contains "ED"
 +
REVISION="1.04 (13-AUG-2021)"
    
#                                                                                                             
 
#                                                                                                             
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  grep -q BRUKER tmp2 && grep -q CBF tmp2  && DET=Bruker-cbf   
 
  grep -q BRUKER tmp2 && grep -q CBF tmp2  && DET=Bruker-cbf   
 
  grep -q CMOS1 tmp2 && DET=adsc-CMOS1   
 
  grep -q CMOS1 tmp2 && DET=adsc-CMOS1   
  grep -q MARCONTROL tmp2 && DET=OLDMAR                  
+
  grep -q MARCONTROL tmp2 && DET=OLDMAR
 +
grep -q "WAVELENGTH=0.0" tmp2 && DET=experimental-ED                                   
 
else
 
else
 
  h5dump -d "/entry/instrument/detector/description" $FIRSTFRAME | grep -i Eiger > /dev/null && DET=eiger
 
  h5dump -d "/entry/instrument/detector/description" $FIRSTFRAME | grep -i Eiger > /dev/null && DET=eiger
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   DETECTOR_DISTANCE=`grep ^DISTANCE tmp2 | sed s/DISTANCE=/-/`                                                                     
 
   DETECTOR_DISTANCE=`grep ^DISTANCE tmp2 | sed s/DISTANCE=/-/`                                                                     
 
   OSCILLATION_RANGE=`grep OMEGA_DELTA tmp2 | sed s/OMEGA_DELTA=//`   
 
   OSCILLATION_RANGE=`grep OMEGA_DELTA tmp2 | sed s/OMEGA_DELTA=//`   
   DIRECTION_OF_DETECTOR_X_AXIS="-1 0 0"                                                                 
+
   DIRECTION_OF_DETECTOR_X_AXIS="-1 0 0"  
 +
                                                                  
 +
elif [ "$DET" == "experimental-ED" ]; then
 +
  DETECTOR="ADSC MINIMUM_VALID_PIXEL_VALUE= 1 OVERLOAD= 65000  ! OVERLOAD is really unknown "
 +
  echo --- Electron diffraction data in SMV formart!
 +
  SENSOR_THICKNESS=0.01                                                       
 +
  sed s/\;// tmp2 > tmp1                                                     
 +
  mv tmp1 tmp2                                                               
 +
  X_RAY_WAVELENGTH=`grep WAVELENGTH tmp2 | head -1 | sed s/WAVELENGTH=//`
 +
  NX=`grep SIZE1 tmp2 | tail -1 | sed s/SIZE1=//`
 +
  QX=`grep PIXEL_SIZE tmp2 | sed s/PIXEL_SIZE=//`
 +
  NY=`grep SIZE2 tmp2 | tail -1 | sed s/SIZE2=//`                                           
 +
  QY=$QX 
 +
  BEAM_CENTER_X=`grep BEAM_CENTER_X tmp2 | sed s/BEAM_CENTER_X=//`
 +
  BEAM_CENTER_Y=`grep BEAM_CENTER_Y tmp2 | sed s/BEAM_CENTER_Y=//`
 +
  QXY=`echo "scale=1; $QX*($BEAM_CENTER_X+$BEAM_CENTER_Y)" | bc -l`
 +
  QYO=`echo "scale=1; $QY*$BEAM_CENTER_Y" | bc -l`
 +
      if [ "$QXY" "<" "$BEAM_CENTER_X" ] ; then
 +
      ORGX=`echo "scale=2; $BEAM_CENTER_Y/$QX" | bc -l`
 +
      ORGY=`echo "scale=2; $BEAM_CENTER_X/$QX" | bc -l`
 +
      else
 +
      ORGX=`echo "scale=2; $BEAM_CENTER_X/1" | bc -l`
 +
      ORGY=`echo "scale=2; $BEAM_CENTER_Y/1" | bc -l`
 +
      fi
 +
  DETECTOR_DISTANCE=`grep ^DISTANCE tmp2 | sed s/DISTANCE=//`                                                                   
 +
  OSCILLATION_RANGE=`grep OSC_RANGE tmp2 | sed s/OSC_RANGE=//`
 +
  STARTING_ANGLE=`grep OSC_START tmp2 | sed s/OSC_START=//`
 +
  echo --- For TIMEPIX detector, please fix ROTATION_AXIS yourself!
 +
  DIRECTION_OF_DETECTOR_X_AXIS="1 0 0"
    
elif [ "$DET" == "pilatus" ]; then
 
elif [ "$DET" == "pilatus" ]; then
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