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193 bytes removed ,  13:12, 8 October 2018
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=== other programs: [[XDS-Viewer]], [[XDSSTAT]], [[XDSCC12]], [[XDSGUI]], [[XSCALE_ISOCLUSTER]]  ===
 
=== other programs: [[XDS-Viewer]], [[XDSSTAT]], [[XDSCC12]], [[XDSGUI]], [[XSCALE_ISOCLUSTER]]  ===
... can be downloaded from ftp://turn5.biologie.uni-konstanz.de/pub/mac_bin/ . A simple way to obtain them is
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... can be downloaded from ftp://turn5.biologie.uni-konstanz.de/pub/mac_bin/ . A simple way to obtain them is is to open a Terminal, and type:
 
  sudo su
 
  sudo su
 
which asks for the password and gives you administrator permissions. Then,
 
which asks for the password and gives you administrator permissions. Then,
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# any folder would do; here we use /usr/local/bin/mac_bin
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mkdir -p /usr/local/bin/mac_bin
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cd /usr/local/bin/mac_bin
 
  curl -O -R ftp://turn5.biologie.uni-konstanz.de/pub/mac_bin/get_folder.sh
 
  curl -O -R ftp://turn5.biologie.uni-konstanz.de/pub/mac_bin/get_folder.sh
 
  chmod +x get_folder.sh
 
  chmod +x get_folder.sh
 
  ./get_folder.sh
 
  ./get_folder.sh
Then, using the Finder window which should have opened automagically, install XDSGUI and XDS-Viewer graphically, by pulling them into the Applications folder.  
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If you want to update the programs some time later, just run these commands again.
    
In order to enable [[Eiger]] data processing, the <code>get_folder.sh</code> script  
 
In order to enable [[Eiger]] data processing, the <code>get_folder.sh</code> script  
 
# copies Dectris' Neggia library into /usr/local/lib64
 
# copies Dectris' Neggia library into /usr/local/lib64
# copies [[Eiger#General_aspects|eiger2cbf-osx]] into /usr/local/bin, but under the name <code>H5ToXds</code>.
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# copies [[Eiger#General_aspects|eiger2cbf-osx]] into /usr/local/bin, but under the name <code>H5ToXds</code>
[[Generate_XDS.INP]] requires <code>h5dump</code> , and either you install this through [https://en.wikipedia.org/wiki/Homebrew_(package_management_software) homebrew]
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# copies [https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-1.8/hdf5-1.8.7/bin/mac-intel-x86_64/utilities/h5dump version 1.8.7] of <code>h5dump</code> into /usr/local/bin
brew install hdf5
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or you install [http://phenix-online.org Phenix] in which case the <code>h5dump</code> provided by the Phenix package will be used by [[Generate_XDS.INP]].
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Since the script updates itself, it may have to be run twice, unless you freshly downloaded it.
      
Lastly, it is useful (for e.g. XDSGUI) to install <code>xxdiff</code> from http://furius.ca/downloads/xxdiff/releases/macosx/
 
Lastly, it is useful (for e.g. XDSGUI) to install <code>xxdiff</code> from http://furius.ca/downloads/xxdiff/releases/macosx/
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