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# revision 0.67 . KD 02/10/2016 add BM30A (ADSC SERIAL 924) reverse_phi
# revision 0.67 . KD 02/10/2016 add BM30A (ADSC SERIAL 924) reverse_phi
# revision 0.68 . KD 24/10/2016 add -H option (follow symlinks) to "find" command (thanks to Jan Gebauer!)
# revision 0.68 . KD 24/10/2016 add -H option (follow symlinks) to "find" command (thanks to Jan Gebauer!)
REVISION="0.68 (24-Oct-2016)"
# revision 0.69 . KD 04/11/2016 add CMOS-1 MBC Detector at ALS 4.2.2
REVISION="0.69 (04-Nov-2016)"
#
#
# usage: e.g. generate_XDS.INP "/file/system/frms/mydata_1_???.img"
# usage: e.g. generate_XDS.INP "/file/system/frms/mydata_1_???.img"
grep -q BEAM_CENTER_X tmp2 && DET=adsc
grep -q BEAM_CENTER_X tmp2 && DET=adsc
grep -q mar345 tmp2 && DET=MAR345
grep -q mar345 tmp2 && DET=MAR345
grep -q BRUKER tmp2 && grep -q CBF tmp2 && DET=Bruker-cbf
grep -q BRUKER tmp2 && grep -q CBF tmp2 && DET=Bruker-cbf
grep -q CMOS1 tmp2 && DET=adsc-CMOS1
else
else
h5dump -d "/entry/instrument/detector/description" $FIRSTFRAME | grep -i Eiger > /dev/null && DET=eiger
h5dump -d "/entry/instrument/detector/description" $FIRSTFRAME | grep -i Eiger > /dev/null && DET=eiger
# find NX, QX, ORGX and ORGY:
# find NX, QX, ORGX and ORGY:
NX=`grep SIZE1 tmp2 | tail -1 | sed s/SIZE1=//`
NX=`grep SIZE1 tmp2 | tail -1 | sed s/SIZE1=//`
NY=`grep SIZE2 tmp2 | tail -1 | sed s/SIZE2=//`
QX=`grep PIXEL_SIZE tmp2 | sed s/PIXEL_SIZE=//`
QX=`grep PIXEL_SIZE tmp2 | sed s/PIXEL_SIZE=//`
QY=$QX
QY=$QX
BEAM_CENTER_X=`grep BEAM_CENTER_X tmp2 | sed s/BEAM_CENTER_X=//`
BEAM_CENTER_X=`grep BEAM_CENTER_X tmp2 | sed s/BEAM_CENTER_X=//`
# find DETECTOR_DISTANCE and OSCILLATION_RANGE:
# find DETECTOR_DISTANCE and OSCILLATION_RANGE:
DETECTOR_DISTANCE=`grep ^DISTANCE tmp2 | sed s/DISTANCE=//`
DETECTOR_DISTANCE=`grep ^DISTANCE tmp2 | sed s/DISTANCE=//`
OSCILLATION_RANGE=`grep OSC_RANGE tmp2 | sed s/OSC_RANGE=//`
OSCILLATION_RANGE=`grep OSC_RANGE tmp2 | sed s/OSC_RANGE=//`
elif [ "$DET" == "adsc-CMOS1" ]; then
DETECTOR="ADSC MINIMUM_VALID_PIXEL_VALUE= 1 OVERLOAD= 65000"
echo Data from CMOS1 MBC detector.
SENSOR_THICKNESS=0.01
sed s/\;// tmp2 > tmp1
mv tmp1 tmp2
X_RAY_WAVELENGTH=`grep WAVELENGTH tmp2 | head -1 | sed s/WAVELENGTH=//`
NX=`grep SIZE1 tmp2 | tail -1 | sed s/SIZE1=//`
QX=`grep PIXEL_SIZE tmp2 | sed s/PIXEL_SIZE=//`
NY=`grep SIZE2 tmp2 | tail -1 | sed s/SIZE2=//`
QY=$QX
ORGX=`grep BEAM_CENTER_X tmp2 | sed s/BEAM_CENTER_X=//`
ORGY=`grep BEAM_CENTER_Y tmp2 | sed s/BEAM_CENTER_Y=//`
REVERSE_PHI="yes"
DETECTOR_DISTANCE=`grep ^DISTANCE tmp2 | sed s/DISTANCE=/-/`
OSCILLATION_RANGE=`grep OMEGA_DELTA tmp2 | sed s/OMEGA_DELTA=//`
DIRECTION_OF_DETECTOR_X_AXIS="-1 0 0"
elif [ "$DET" == "pilatus" ]; then
elif [ "$DET" == "pilatus" ]; then
if [ "$DET" == "Bruker-cbf" ]; then
if [ "$DET" == "Bruker-cbf" ]; then
echo "DELPHI=15 ! refine less often than the default of 5" >> XDS.INP
echo "DELPHI=15 ! refine less often than the default of 5" >> XDS.INP
elif [ "$DET" == "adsc-CMOS1" ]; then
echo UNTRUSTED_RECTANGLE= 0 1468 2451 2631 >> XDS.INP
elif [ "$DET" == "pilatus" -o "$DET" == "eiger" ]; then
elif [ "$DET" == "pilatus" -o "$DET" == "eiger" ]; then
cat >> XDS.INP << eof
cat >> XDS.INP << eof
