33
edits
Generate XDS.INP: Difference between revisions
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rev 0.62
(rev 0.6.1 (tentative Eiger hdf5 support using h5dump)) |
(rev 0.62) |
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# revision 0.60 . KD 04/04/2016 ADSC detector SN=458 at APS 19-ID has reverse phi (https://zenodo.org/record/45756) | # revision 0.60 . KD 04/04/2016 ADSC detector SN=458 at APS 19-ID has reverse phi (https://zenodo.org/record/45756) | ||
# revision 0.61 . Keitaro 10/04/2016 Add Eiger hdf5 support (may be incomplete; UNTRUSTED_RECTANGLE=s not set) NEED h5dump. | # revision 0.61 . Keitaro 10/04/2016 Add Eiger hdf5 support (may be incomplete; UNTRUSTED_RECTANGLE=s not set) NEED h5dump. | ||
REVISION="0. | # revision 0.62 . Keitaro 11/04/2016 Can give foo_master.h5 instead of foo_??????.h5. | ||
REVISION="0.62 (11-Apr-2016)" | |||
# | # | ||
# usage: e.g. generate_XDS.INP "/file/system/frms/mydata_1_???.img" | # usage: e.g. generate_XDS.INP "/file/system/frms/mydata_1_???.img" | ||
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# we can continue - the frames are found | # we can continue - the frames are found | ||
# Find the first '?' position and the number of '?' to determine DATA_RANGE=. | if echo $NAME_TEMPLATE_OF_DATA_FRAMES | grep '_master.h5$' > /dev/null; then | ||
pos1=`echo "$1" | awk '{print index($0, "?")}'` | NAME_TEMPLATE_OF_DATA_FRAMES=`echo "$NAME_TEMPLATE_OF_DATA_FRAMES" | sed -e 's/_master.h5$/_??????.h5/'` | ||
pos2=`echo "$1" | sed -e "s/[^\?]//g" | awk '{print length+'$pos1' - 1'}` | else | ||
data_first=`cat tmp1 | cut -b $pos1-$pos2 | head -n1|bc` | # Find the first '?' position and the number of '?' to determine DATA_RANGE=. | ||
data_last=`cat tmp1 | cut -b $pos1-$pos2 | tail -n1|bc` | pos1=`echo "$1" | awk '{print index($0, "?")}'` | ||
DATA_RANGE="$data_first $data_last" | pos2=`echo "$1" | sed -e "s/[^\?]//g" | awk '{print length+'$pos1' - 1'}` | ||
data_first=`cat tmp1 | cut -b $pos1-$pos2 | head -n1|bc` | |||
# set SPOT_RANGE to first half of DATA_RANGE | data_last=`cat tmp1 | cut -b $pos1-$pos2 | tail -n1|bc` | ||
data_num=`wc -l tmp1 | awk '{print $1}'` | DATA_RANGE="$data_first $data_last" | ||
data_half=`echo "scale=0; $data_num/2" | bc -l` | |||
data_half=`echo "if ($data_half<=1) 1;if ($data_half>1) $data_half" | bc -l` | # set SPOT_RANGE to first half of DATA_RANGE | ||
spot_last=`echo "scale=0; $data_first+$data_half-1" | bc -l` | data_num=`wc -l tmp1 | awk '{print $1}'` | ||
SPOT_RANGE="$data_first $spot_last" | data_half=`echo "scale=0; $data_num/2" | bc -l` | ||
data_half=`echo "if ($data_half<=1) 1;if ($data_half>1) $data_half" | bc -l` | |||
spot_last=`echo "scale=0; $data_first+$data_half-1" | bc -l` | |||
SPOT_RANGE="$data_first $spot_last" | |||
fi | |||
FIRSTFRAME=`head -1 tmp1` | FIRSTFRAME=`head -1 tmp1` | ||