33
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Changes
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# revision 0.31 . Keitaro 3/2013 - add comment for reversed phi for SPring-8
# revision 0.31 . Keitaro 3/2013 - add comment for reversed phi for SPring-8
# revision 0.32 . Keitaro 3/2013 - add RAXIS support. only tested with RAXIS IV++ and VII.
# revision 0.32 . Keitaro 3/2013 - add RAXIS support. only tested with RAXIS IV++ and VII.
REVISION="0.32 (15-Mar-2013)"
# revision 0.33 . Keitaro 5/2013 - automatically set ROTATION_AXIS=-1 0 0 for SPring-8 BL32XU/41XU/44XU beamlines based on detector serial numbers.
REVISION="0.33 (27-May-2013)"
#
#
# usage: e.g. generate_XDS.INP "frms/mydata_1_???.img"
# usage: e.g. generate_XDS.INP "frms/mydata_1_???.img"
#
#
DETECTOR="XXX MINIMUM_VALID_PIXEL_VALUE=XXX OVERLOAD=XXX"
DETECTOR="XXX MINIMUM_VALID_PIXEL_VALUE=XXX OVERLOAD=XXX"
REVERSE_PHI="no"
ORGX=XXX
ORGX=XXX
ORGY=XXX
ORGY=XXX
SENSOR_THICKNESS=0.01
SENSOR_THICKNESS=0.01
# use first frame of dataset to obtain parameters
# use first frame of dataset to obtain parameters
# Check detector serial number and recognize beamline for reversed-phi setting.
# Known detectors for reversed-phi in SPring-8: 31: BL32XU MX225HE, 38: BL44XU MX225HE, 42: BL44XU MX300HE, 40: BL41XU MX225HE
REVERSEPHI_SNs="
31
38
40
42
"
# get detector serial number and check if it is included in the list
DET_SN=`grep "Detector Serial Number =" tmp2 | sed "s/Detector Serial Number = //"`
if echo "${DET_SN}${REVERSEPHI_SNs}" | sort | uniq -d | grep [0-9] > /dev/null; then
REVERSE_PHI="yes"
fi
# offsets are documented; values can be found in mccd_xdsparams.pl script
# offsets are documented; values can be found in mccd_xdsparams.pl script
eof
eof
else
else
if [ "$REVERSE_PHI" == "no" ]; then
echo 'ROTATION_AXIS=1 0 0 ! at e.g. Australian Synchrotron, SERCAT ID-22 (?), APS 19-ID (?), ESRF BM30A, SPring-8 this needs to be -1 0 0' >> XDS.INP
else
echo 'ROTATION_AXIS=-1 0 0 ! if this is wrong, please contact author.' >> XDS.INP
fi
cat >> XDS.INP << eof
cat >> XDS.INP << eof
DIRECTION_OF_DETECTOR_X-AXIS=1 0 0
DIRECTION_OF_DETECTOR_X-AXIS=1 0 0
DIRECTION_OF_DETECTOR_Y-AXIS=0 1 0
DIRECTION_OF_DETECTOR_Y-AXIS=0 1 0
INCIDENT_BEAM_DIRECTION=0 0 1
INCIDENT_BEAM_DIRECTION=0 0 1
FRACTION_OF_POLARIZATION=0.98 ! better value is provided by beamline staff!
FRACTION_OF_POLARIZATION=0.98 ! better value is provided by beamline staff!
POLARIZATION_PLANE_NORMAL=0 1 0
POLARIZATION_PLANE_NORMAL=0 1 0
