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XDSGUI: Difference between revisions
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(Created page with "XDSgui is a GUI (graphical user interface) for XDS that is supposed to help both novice and experienced users. It displays the ASCII and cbf files that XDS writes, and can ru...") |
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shows COLSPOT.LP | shows COLSPOT.LP | ||
IDXREF | |||
DEFPIX | |||
INTEGRATE | == IDXREF == | ||
shows IDXREF.LP | |||
== DEFPIX == | |||
shows DEFPIX.LP | |||
== INTEGRATE == | |||
shows INTEGRATE.LP on the left side. During the INTEGRATE step, the temporary files are displayed. On the right side, plots of the | |||
tabular quantities given for each frame, or for each batch of data are shown. For the refined quantities, only the changes are plotted. | tabular quantities given for each frame, or for each batch of data are shown. For the refined quantities, only the changes are plotted. | ||
CORRECT | |||
The three lines in the CHI^2 plot are the Chi^2 values obtained during scaling, for the ABSORP, MODPIX and DECAY corrections, respectively. | |||
Tools | == CORRECT == | ||
shows CORRECT.LP on the left, and plots of tabular quantities on the right. The upper line in the I/sigma plot gives I/sigma(asmptotic). | |||
The three lines in the CHI^2 plot are the Chi^2 values obtained during scaling, for the ABSORP, MODPIX and DECAY corrections, respectively. | |||
== Tools == | |||
offers possibilities for running short scripts. Several such scripts are pre-defined; the user may create his own scripts. The first | |||
item offers to run XDS-viewer for | item offers to run XDS-viewer for | ||
displaying the predicted pattern of reflections for a user-specified frame, together with the frame itself. The other pre-defined scripts | displaying the predicted pattern of reflections for a user-specified frame, together with the frame itself. The other pre-defined scripts | ||
run commands that either simplify to save/restore the current data processing files to/from a "save" directory, or to manipulate XDS.INP in | run commands that either simplify to save/restore the current data processing files to/from a "save" directory, or to manipulate XDS.INP in | ||
several ways, or to run e.g. pointless on the generated XDS_ASCII.HKL file. If scripts are modified, they are saved to ~/.xds-gui . | several ways, or to run e.g. pointless on the generated XDS_ASCII.HKL file. If scripts are modified, they are saved to ~/.xds-gui . | ||
XDSSTAT | |||
XDSCONV | |||
== XDSSTAT == | |||
the tab is currently non-functional | |||
== XDSCONV == | |||
a simple XDSCONV.INP may be edited by the user, and saved. Upon clicking a button, xdsconv is run and if necessary a MTZ file is | |||
produced. XDSCONV.LP may be displayed. | produced. XDSCONV.LP may be displayed. | ||
The current version of the program can be downloaded from | The current version of the program can be downloaded from | ||