Synchrotrons: Difference between revisions

Jump to navigation Jump to search

Synchrotrons (edit)

Revision as of 21:28, 26 January 2017

6,891 bytes added ,  26 January 2017
m
no edit summary
mNo edit summary
mNo edit summary
 
(24 intermediate revisions by 10 users not shown)
Line 1: Line 1:
For a list of synchrotrons please see [http://www.esrf.eu/UsersAndScience/Links/Synchrotrons Synchrotron beamlines]
For a list of synchrotrons please see [http://www.esrf.eu/UsersAndScience/Links/Synchrotrons Synchrotron beamlines]


The following beamlines offer mail-in service:
The following beamlines offer mail-in service or remote access:
(compiled from the CCP4 BB July 2008)
(compiled from the CCP4 BB July 2008)


Line 7: Line 7:
Wavelength).
Wavelength).
Remote access is currently available on the sector 5 stations (5.0.1
Remote access is currently available on the sector 5 stations (5.0.1
5.0.2 and 5.0.3) for PRT members only.
5.0.2 and 5.0.3) for PRT members only. ALS 4.2.2 beamline has remote capability


2.  Beamline 3BM1 at the Australian Synchrotron http://www.synchrotron.org.au has full remote access available for users. We use the same Blu-Ice gui as SSRL and use the SAM robot.
2.  Beamline 3BM1 at the Australian Synchrotron http://www.synchrotron.org.au has full remote access available for users. We use the same Blu-Ice gui as SSRL and use the SAM robot.
Line 17: Line 17:
4.  The canadian light source http://www.lightsource.ca/ has at least mail in protein crystallography.  
4.  The canadian light source http://www.lightsource.ca/ has at least mail in protein crystallography.  


5.  MacCHESS http://www.macchess.cornell.edu/ does "mail-in" collection on all PX beamlines.
5.  MacCHESS http://www.macchess.cornell.edu/ does "remote" collection on MX beamline F1, monochromatic wavelength set near Se edge.


6.  All the ESRF MX/PX beamlines (ID14-1, ID14-2, ID14-4, ID23-1, ID29), and the CRG beam-line BM14, have remote access.
6.  All the ESRF MX/PX beamlines (ID14-1, ID14-2, ID14-4, ID23-1, ID29), and the CRG beam-line BM14, have remote access.
Line 24: Line 24:
http://www.esrf.eu/Industry/our_services/xpress-service/xpress-service
http://www.esrf.eu/Industry/our_services/xpress-service/xpress-service


7.  SEC-CAT 22-ID and 22-BM at APS http://www.ser-cat.org/ will do both mail-in and remote
7.  SEC-CAT 22-ID and 22-BM at APS http://www.ser-cat.org/ will do both mail-in (for CAT members) and remote


8.  SPring8 in Japan http://www.spring8.or.jp/en/about_us/organization/research_utilization/biology has a mail-in system.
8.  SPring8 in Japan http://www.spring8.or.jp/en/about_us/organization/research_utilization/biology has a mail-in system.


9.  SSRL http://www-ssrl.slac.stanford.edu/ all PX beamlines have [http://smb.slac.stanford.edu/public/facilities/remote_access/ remote capability].
9.  SSRL http://smb.slac.stanford.edu/ all PX beamlines have [http://smb.slac.stanford.edu/public/facilities/remote_access/ remote capability]. About 75% of the users use fully remote data collection routinely


10. CAMD's PX beamline http://www.camd.lsu.edu/gcpcc/GCPCChome.htm has a mail-in program for both consortium members and outside users.
10. CAMD's PX beamline http://www.camd.lsu.edu/gcpcc/GCPCChome.htm has a mail-in program for both consortium members and outside users.
11. BESSY BL14.1 and BL14.2 http://www.mx.bessy.de, The BESSY-MX group is offering the "mail-in" service for industrial collaborators.
12. SLS (http://sls.web.psi.ch/): For industrial users there is a Mail-In Service available since more than 3 years. For technical questions please contact Joachim Diez (Joachim.Diez@psi.ch) or Clemens Schulze-Briese (clemens.schulze@psi.ch), for questions about contracts please contact Philipp Dietrich (philipp.dietrich@psi.ch). Remote operation is in preparation for all beamlines.


A useful link from PDB containing synchrotron info:
A useful link from PDB containing synchrotron info:
http://biosync.rcsb.org/
http://biosync.rcsb.org/ e.g. to find info on number of solved structures, method, and so on: choose one of the structure galleries, for example Europe:
 
http://biosync.sbkb.org/stats.do?stats_sec=GALLRY&stats_focus_lvl=RGNL&stats_region=European
 
Then choose a beamline, say ID23-1:
 
http://biosync.sbkb.org/stats.do?stats_sec=GALLRY&stats_focus_lvl=BMLN&stats_site=ESRF&stats_bmln=ID23-1
 
Then, near the top of the page, see the line "Table of general information
(software, resolution, R-factors, etc) in tab delimited text format"
 
http://biosync.sbkb.org/biosync_pdbtext/measureESRFID23-1.txt
 
You'll get a table where the solution method and software follows the
PDB_ID.  There's a RELEASE DATE at the end on which you may sort.
 
 
 
 
<table border = "1">
<tr>
<b>
<td>Synchrotron</td>
<td>Beamline</td>
<td>Mail-in/ Remote</td>
<td>type of puck</td>
<td>Fixed Wavelength/ Se-SAD/ MAD</td>
<td>URL</td>
</b></tr>
<tr>
<td>ALS</td>
<td>4.2.2 </td>
<td>Remote capabilities </td>
<td>ACTOR magazine </td>
<td> MAD </td>
<td> http://www-als.lbl.gov/als/techspecs/bl4.2.2.html  </td>
</tr>
<tr>
<b>
<td>ALS</td>
<td>5.0.1</td>
<td>Mail & Remote (PRT members)</td>
<td>ALS puck and Uni-puck</td>
<td>Fixed Wavelength/ Se-SAD </td>
<td>http://bcsb.als.lbl.gov/wiki/index.php/5.0.1</td>
</b></tr>
<tr>
<td>ALS </td>
<td>5.0.2 </td>
<td>Mail & Remote (PRT members) </td>
<td>ALS puck and Uni-puck</td>
<td>MAD </td>
<td>http://bcsb.als.lbl.gov/wiki/index.php/5.0.2</td>
</tr>
<tr>
<td>ALS</td>
<td>5.0.3 </td>
<td>Remote (PRT members) </td>
<td>ALS puck and Uni-puck</td>
<td> Fixed Wavelength/ Se-SAD </td>
<td>http://bcsb.als.lbl.gov/wiki/index.php/5.0.3</td>
</tr>
<td>ALS</td>
<td>8.2.1 </td>
<td>?</td>
<td>ALS Puck, Uni-Puck and ACTOR magazines</td>
<td>MAD</td>
<td>http://bcsb.als.lbl.gov/wiki/index.php/8.2.1 and [http://bcsb.als.lbl.gov/wiki/index.php/Automounter automonter] notes</td>
</tr>
<tr>
<td>ALS</td>
<td>8.2.2 </td>
<td>?</td>
<td>ALS Puck, Uni-Puck and ACTOR magazines</td>
<td>MAD</td>
<td>http://bcsb.als.lbl.gov/wiki/index.php/8.2.2 and [http://bcsb.als.lbl.gov/wiki/index.php/Automounter automonter] notes</td>
</tr>
 
<tr>
<td>Australian Synchrotron </td>
<td>3BM1 </td>
<td>remote </td>
<td>SSRL cassettes ? </td>
<td>MAD ?</td>
<td>http://www.synchrotron.org.au/ </td>
</tr>
 
<tr>
<td>Australian Synchrotron </td>
<td>3ID (2009) </td>
<td>remote </td>
<td>SSRL cassettes ? </td>
<td>MAD ?</td>
<td>http://www.synchrotron.org.au/ </td>
</tr>
 
<tr>
<td>BNL/NSLS </td>
<td>six PXRR beamlines</td>
<td>Mail-in </td>
<td> ? </td>
<td> ? </td>
<td>http://www.px.nsls.bnl.gov/ http://www.px.nsls.bnl.gov/Mailin.html </td>
</tr>
 
<tr>
<td>CLS </td>
<td> ?</td>
<td>Mail-in </td>
<td>? </td>
<td>? </td>
<td>http://www.lightsource.ca/ </td>
</tr>
 
<tr>
<td>MacCHESS </td>
<td>F1 </td>
<td>Remote </td>
<td>ALS puck, Uni-puck and ACTOR pucks </td>
<td>Fixed Wavelength/ Se-SAD </td>
<td>http://www.macchess.cornell.edu/ </td>
</tr>
 
<tr>
<td>ESRF </td>
<td>ID14-1 </td>
<td>Remote </td>
<td> ?</td>
<td> ?</td>
<td>http://www.esrf.eu/UsersAndScience/Experiments/MX/How_to_use_our_beamlines/remote-access </td>
</tr>
 
<tr>
<td>ESRF </td>
<td>ID14-2 </td>
<td>Remote </td>
<td> ?</td>
<td> ?</td>
<td>http://www.esrf.eu/UsersAndScience/Experiments/MX/How_to_use_our_beamlines/remote-access </td>
</tr>
<tr>
<td>ESRF </td>
<td>ID14-4 </td>
<td>Remote </td>
<td> ?</td>
<td> ?</td>
<td>http://www.esrf.eu/UsersAndScience/Experiments/MX/How_to_use_our_beamlines/remote-access </td>
</tr>
<tr>
<td>ESRF </td>
<td>ID23-1 </td>
<td>Remote </td>
<td> ?</td>
<td> ?</td>
<td>http://www.esrf.eu/UsersAndScience/Experiments/MX/How_to_use_our_beamlines/remote-access </td>
</tr>
<tr>
<td>ESRF </td>
<td>ID29 </td>
<td>Remote </td>
<td> ?</td>
<td> ?</td>
<td>http://www.esrf.eu/UsersAndScience/Experiments/MX/How_to_use_our_beamlines/remote-access </td>
</tr>
<tr>
<td>ESRF </td>
<td>BM14 </td>
<td>Remote </td>
<td> ?</td>
<td> ?</td>
<td>http://www.esrf.eu/UsersAndScience/Experiments/MX/How_to_use_our_beamlines/remote-access </td>
</tr>
 
<tr>
<td>ESRF </td>
<td>MXpress </td>
<td>Mail-in </td>
<td> ?</td>
<td> ?</td>
<td>http://www.esrf.eu/Industry/our_services/xpress-service/xpress-service </td>
</tr>
 
<tr>
<td>APS </td>
<td>SEC-CAT 22-ID </td>
<td>Mail-in & Remote </td>
<td>ALS Puck (14?)</td>
<td>MAD</td>
<td>http://www.ser-cat.org/ </td>
</tr>
 
<tr>
<td>APS </td>
<td>SEC-CAT 22-BM </td>
<td>Mail-in & Remote </td>
<td>ALS Puck (6)</td>
<td>MAD</td>
<td>http://www.ser-cat.org/ </td>
</tr>
 
<tr>
<td>Spring8 </td>
<td>? </td>
<td>Mail-in </td>
<td> ?</td>
<td> ?</td>
<td>http://www.spring8.or.jp/en/about_us/organization/research_utilization/biology </td>
</tr>
 
<tr>
<td>SSRL </td>
<td>all PX beamlines </td>
<td>remote </td>
<td> SSRL cassette and Uni-puck </td>
<td> 4 MAD, 2 Se-SAD </td>
<td>http://smb.slac.stanford.edu/ -- user guide[http://smb.slac.stanford.edu/public/users_guide/manual/Using_SSRL_Automated_Mounti.html automounter] and [http://smb.slac.stanford.edu/public/users_guide/manual/ contents] -- </td>
</tr>
 
<tr>
<td>CAMD </td>
<td>PX beamline </td>
<td>Mail-in </td>
<td> ?</td>
<td>MAD</td>
<td>http://www.camd.lsu.edu/gcpcc/GCPCChome.htm </td>
</tr>
 
<tr>
<td>BESSY </td>
<td>BL14.1 </td>
<td>Mail-in (industrial) </td>
<td> ? </td>
<td> ?</td>
<td>http://www.mx.bessy.de/ </td>
</tr>
 
<tr>
<td>BESSY </td>
<td>BL14.2 </td>
<td>Mail-in (industrial) </td>
<td> ? </td>
<td> ?</td>
<td>http://www.mx.bessy.de/ </td>
</tr>
 
<tr>
<td>SLS </td>
<td> ?</td>
<td>Mail-in (industrial) </td>
<td> ?</td>
<td> ?</td>
<td>http://sls.web.psi.ch/ </td>
</tr>
 
<tr>
<td>APS </td>
<td>IMCA-CAT 17-ID </td>
<td>Mail-in; Remote (industrial) </td>
<td>ACTOR magazines </td>
<td>MAD </td>
<td>http://www.imca.aps.anl.gov/ </td>
</tr>
 
<tr>
<td>APS </td>
<td>IMCA-CAT 17-BM </td>
<td>Mail-in; Remote (industrial) </td>
<td>ACTOR magazines </td>
<td>MAD </td>
<td>http://www.imca.aps.anl.gov/ </td>
</tr>
 
<tr>
<td> </td>
<td> </td>
<td> </td>
<td> </td>
<td> </td>
<td> </td>
</tr>
 
</table>
 
'''''Please copy and paste the empty row for the next person to fill in'''''
 
See also the [http://smb.slac.stanford.edu/facilities/hardware/SAM/robosync/ robosync page] on automounters at synchrotrons.
Retrieved from "https://wiki.uni-konstanz.de/ccp4/index.php/Special:MobileDiff/1017...2430"
Cookies help us deliver our services. By using our services, you agree to our use of cookies.
More information

Navigation menu