Difference between revisions of "Storage of diffraction data"
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| − | Synchrotrons are very good at archiving all collected data. In contrast, there's no requirement for including diffraction data when submitting a structure to the PDB. Consequently, the connection between structure and the underlying data is lost for all practical purposes | + | Synchrotrons are very good at archiving all collected data. In contrast, there's no requirement for including diffraction data when submitting a structure to the PDB. Consequently, the connection between structure and the underlying data is lost for all practical purposes. |
| − | == Diffraction data storage | + | == Diffraction data storage solutions (2018) == |
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* zenodo.org (including https://zenodo.org/communities/mx/?page=1&size=20 but maybe other "communities"); this is managed by CERN | * zenodo.org (including https://zenodo.org/communities/mx/?page=1&size=20 but maybe other "communities"); this is managed by CERN | ||
| − | * SBGrid https://data.sbgrid.org/ | + | * SBGrid https://data.sbgrid.org/ - see https://www.nature.com/articles/ncomms10882 |
* proteindiffraction.org (this has e.g. almost? all the JCSG data!) | * proteindiffraction.org (this has e.g. almost? all the JCSG data!) | ||
* Australian synchrotron.store - see https://store.synchrotron.org.au and http://scripts.iucr.org/cgi-bin/paper?S1399004714016174 | * Australian synchrotron.store - see https://store.synchrotron.org.au and http://scripts.iucr.org/cgi-bin/paper?S1399004714016174 | ||
* the ESRF makes all collected data available after 3 years; see http://www.esrf.eu/datapolicy | * the ESRF makes all collected data available after 3 years; see http://www.esrf.eu/datapolicy | ||
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| + | There are many more local repositories, e.g. for universities. | ||
| + | |||
| + | Recent publications: http://journals.iucr.org/m/issues/2017/01/00/ti5008/index.html | ||
| + | http://journals.iucr.org/m/issues/2017/01/00/hi0156/index.html | ||
Latest revision as of 20:42, 17 January 2018
Synchrotrons are very good at archiving all collected data. In contrast, there's no requirement for including diffraction data when submitting a structure to the PDB. Consequently, the connection between structure and the underlying data is lost for all practical purposes.
Diffraction data storage solutions (2018)[edit | edit source]
- zenodo.org (including https://zenodo.org/communities/mx/?page=1&size=20 but maybe other "communities"); this is managed by CERN
- SBGrid https://data.sbgrid.org/ - see https://www.nature.com/articles/ncomms10882
- proteindiffraction.org (this has e.g. almost? all the JCSG data!)
- Australian synchrotron.store - see https://store.synchrotron.org.au and http://scripts.iucr.org/cgi-bin/paper?S1399004714016174
- the ESRF makes all collected data available after 3 years; see http://www.esrf.eu/datapolicy
There are many more local repositories, e.g. for universities.
Recent publications: http://journals.iucr.org/m/issues/2017/01/00/ti5008/index.html http://journals.iucr.org/m/issues/2017/01/00/hi0156/index.html
