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Split NMR-style multiple model pdb files into individual models: Difference between revisions
Split NMR-style multiple model pdb files into individual models (edit)
Revision as of 23:45, 4 January 2011
, 4 January 2011→Bash/awk one-liner
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grep -n 'MODEL\|ENDMDL' models.pdb | cut -d: -f 1 | \ | grep -n 'MODEL\|ENDMDL' models.pdb | cut -d: -f 1 | \ | ||
awk '{if(NR%2) printf "sed -n %d,",$1+1; else printf "%dp > model_%03d.pdb\n", $1-1,NR/2;}' | bash -sf | awk '{if(NR%2) printf "sed -n %d,",$1+1; else printf "%dp models.pdb > model_%03d.pdb\n", $1-1,NR/2;}' | bash -sf | ||
== Bash script == | == Bash script == | ||