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185 bytes added ,  18:25, 4 September 2010
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* A collection of links to structure-based domain parsers is at http://binf.gmu.edu/ttaylor/homepagelinks.html
 
* A collection of links to structure-based domain parsers is at http://binf.gmu.edu/ttaylor/homepagelinks.html
 
* Domain boundaries are available through RCSB PDB RESTful web services described at: http://www.pdb.org/pdb/software/rest.do. For example, the URL http://www.pdb.org/pdb/rest/das/pdbchainfeatures/features?segment=1AJH.A returns an XML file with SCOP, CATH, DP, PDP, PFAM, InterPro domain boundaries, plus secondary structure information by DSSP, STRIDE, and the structure author.
 
* Domain boundaries are available through RCSB PDB RESTful web services described at: http://www.pdb.org/pdb/software/rest.do. For example, the URL http://www.pdb.org/pdb/rest/das/pdbchainfeatures/features?segment=1AJH.A returns an XML file with SCOP, CATH, DP, PDP, PFAM, InterPro domain boundaries, plus secondary structure information by DSSP, STRIDE, and the structure author.
 
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* In the sequence tab for each PDB entry, (for example, http://www.pdb.org/pdb/explore/remediatedSequence.do?structureId=1AJH), the domain assignment from SCOP, DP, CATH etc. are given.
    
=== Functional annotation ===
 
=== Functional annotation ===
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