User contributions for Kay
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5 February 2024
- 10:3210:32, 5 February 2024 diff hist +1 m SHELX C/D/E →How to tell SHELXE about NCS in a molecular replacement solution PDB file: fix name current Tag: Visual edit
24 January 2024
- 19:3719:37, 24 January 2024 diff hist +164 m SHELX C/D/E →References: add 2024 SHELXE reference Tag: Visual edit
- 19:3319:33, 24 January 2024 diff hist +3,460 SHELX C/D/E →Full list of SHELXE options ( Version 2021/1; defaults in brackets)
3 January 2024
- 10:4110:41, 3 January 2024 diff hist +27 Phase problem →Direct Methods current
- 10:4010:40, 3 January 2024 diff hist +58 Phase problem →Direct Methods
- 10:3910:39, 3 January 2024 diff hist +60 Phasing add link current Tag: Visual edit
- 10:3810:38, 3 January 2024 diff hist +54 SHELX C/D/E →References: add "see also" section, and link existing article Tag: Visual edit: Switched
7 June 2023
- 09:3009:30, 7 June 2023 diff hist −35 m SHELX C/D/E →Minimum distance between atoms (MIND): remove "(as in the above thaumatin example" because that does not exist
24 May 2023
- 23:5423:54, 24 May 2023 diff hist −3 m SHELX C/D/E →References
- 23:5323:53, 24 May 2023 diff hist +247 m SHELX C/D/E →References: add Usón, I. & Sheldrick, G. M. (2018)
11 January 2023
- 11:0711:07, 11 January 2023 diff hist +76 Coot →Installing Coot on Windows current
7 December 2022
- 09:5609:56, 7 December 2022 diff hist +1 Resolution fix typo current
- 09:2609:26, 7 December 2022 diff hist +2 m Resolution the = was missing
4 June 2022
- 08:2908:29, 4 June 2022 diff hist −693 Coot →As of 0.4, coot works with gtk+2: remove old section Tag: Visual edit
- 08:2808:28, 4 June 2022 diff hist +169 Coot →Assorted questions and answers (from the mailinglist): start section "See also"
19 May 2022
- 20:4520:45, 19 May 2022 diff hist +481 Centric and acentric reflections No edit summary current
- 20:3020:30, 19 May 2022 diff hist +88 Centric and acentric reflections →References
24 March 2022
- 09:0209:02, 24 March 2022 diff hist −34 Coot No edit summary
3 March 2022
- 12:2112:21, 3 March 2022 diff hist +104 Stereo →Nvidia 3D Vision 2: March 2022 update current
12 January 2022
- 16:5116:51, 12 January 2022 diff hist −108 SHELX C/D/E →Full list of SHELXE options ( Version 2021/1; defaults in brackets)
- 16:5016:50, 12 January 2022 diff hist +549 m SHELX C/D/E →Full list of SHELXE options ( Version 2019/1; defaults in brackets): update to 2021/1
7 January 2022
23 December 2021
31 August 2021
- 23:1023:10, 31 August 2021 diff hist +46 Twinning →Solution current
- 23:1023:10, 31 August 2021 diff hist −26 Twinning →Tests for Twinning: remove empty section
- 23:0923:09, 31 August 2021 diff hist −75 Twinning →See also: removed because CCP4 developers' wiki has been terminated
- 23:0623:06, 31 August 2021 diff hist +100 Twinning →Refinement: add Fig3 of Murshudov paper Tag: Visual edit
- 23:0523:05, 31 August 2021 diff hist +100 N File:G. Murshudov, Appl. Comput. Math., V.10, N.2, 2011, pp.250-261 Fig3.png No edit summary current
15 May 2021
- 13:0913:09, 15 May 2021 diff hist +73 m Coot blog link
30 April 2021
- 12:5412:54, 30 April 2021 diff hist −68 Programs to convert X-ray diffraction image file formats to graphics file formats update links and remove italics current
- 12:4812:48, 30 April 2021 diff hist −43 Main Page →What is CCP4?: remove ccp4wiki.org
23 April 2021
22 April 2021
- 19:1119:11, 22 April 2021 diff hist +14 Scaled unmerged data files →Where to find scaled unmerged data?: add autoPROC and put autoBUSTER in brackets because I don't think it applies Tag: Visual edit
- 19:0919:09, 22 April 2021 diff hist +21 Scaled unmerged data files →Where to find scaled unmerged data?: add entry for staraniso Tag: Visual edit
- 17:4517:45, 22 April 2021 diff hist +39 Scaled unmerged data files →xdsme: add text
- 17:4517:45, 22 April 2021 diff hist +182 m Scaled unmerged data files →HKL2000: add text
27 March 2021
- 17:2317:23, 27 March 2021 diff hist +339 SHELX C/D/E →Full list of SHELXE options (defaults in brackets): update
19 March 2021
- 19:1219:12, 19 March 2021 diff hist +68 Adxv No edit summary current
- 18:5218:52, 19 March 2021 diff hist +78 Adxv No edit summary
- 18:4218:42, 19 March 2021 diff hist +450 Adxv No edit summary
12 March 2021
- 10:5410:54, 12 March 2021 diff hist +77 N Adxv Created page with "adxv is a program for displaying diffraction with x2go, the -nopixmap option"
4 March 2021
- 18:0118:01, 4 March 2021 diff hist −1 Phenix →phenix.elbow - electronic Ligand Builder and Optimisation Workbench current
5 February 2021
- 11:3911:39, 5 February 2021 diff hist −10 Coot →Installing Coot on Windows
2 February 2021
- 12:4312:43, 2 February 2021 diff hist −124 Coot →Installation from source code manually: removed - too old
- 12:4212:42, 2 February 2021 diff hist −8,079 Custom building Coot from source code removed because it is 10 yrs old current Tag: Blanking
- 12:4012:40, 2 February 2021 diff hist −1,198 Coot →Installation from source code via autobuild scripts
- 12:3912:39, 2 February 2021 diff hist −45 Coot →Installation from a distributed binary tarball package
- 11:3211:32, 2 February 2021 diff hist −154 Coot →Installation from a distributed binary tarball package
20 December 2020
- 19:3019:30, 20 December 2020 diff hist +439 Coot →Example 5: Ensemble GUI
18 December 2020
- 10:4610:46, 18 December 2020 diff hist −19 Mtz2hkl No edit summary current
- 10:4510:45, 18 December 2020 diff hist +30 m Mtz2hkl update link
6 December 2020
23 November 2020
- 13:2313:23, 23 November 2020 diff hist +226 N Refmac Created page with "Refmac instructions on Garib’s site https://www2.mrc-lmb.cam.ac.uk/groups/murshudov/content/refmac/refmac_keywords.html#id.r2gu4ckb7nka e.g. show the proper command to par..." current
9 October 2020
- 10:0910:09, 9 October 2020 diff hist +263 Coot →specify Coot download directory, like specifying backup dir by COOT_BACKUP_DIR?
26 August 2020
- 12:0312:03, 26 August 2020 diff hist +625 Phenix →Tips and Tricks: regression tests
1 July 2020
- 19:2019:20, 1 July 2020 diff hist −4 Phenix →NCS: try to correct
19 June 2020
- 08:5608:56, 19 June 2020 diff hist −11 Crystals →Data collection: separate X-ray generators and detectors current
- 08:4908:49, 19 June 2020 diff hist +2 m Coot →Hardware Stereo
18 June 2020
- 09:3709:37, 18 June 2020 diff hist +79 Coot →Hardware Stereo
3 June 2020
- 17:5817:58, 3 June 2020 diff hist +740 Phenix →Special positions: Bond across symmetry axis
14 May 2020
- 08:0708:07, 14 May 2020 diff hist +151 Coot →Get rid of the "fix nomenclature" check
- 08:0508:05, 14 May 2020 diff hist +140 Coot →Get rid of the "fix nomenclature" check
13 May 2020
- 14:1414:14, 13 May 2020 diff hist −174 Coot →External Links
- 14:0414:04, 13 May 2020 diff hist +508 Coot →Hardware Stereo
7 May 2020
- 19:1919:19, 7 May 2020 diff hist +1,355 Some ways to calculate the radiation dose that a crystal has absorbed add corrections
- 10:0510:05, 7 May 2020 diff hist +2,735 N Some ways to calculate the radiation dose that a crystal has absorbed create page from CCP4BB posting
- 09:5909:59, 7 May 2020 diff hist +49 Crystals →Data collection
- 09:5709:57, 7 May 2020 diff hist +27 Crystals →Data collection: add James Holton's posting of May 6, 2020
26 April 2020
- 16:4916:49, 26 April 2020 diff hist −16 Coot →Installing Coot on Windows
22 April 2020
- 21:0021:00, 22 April 2020 diff hist +307 Coot →some symmetry mates not shown
1 April 2020
- 22:0422:04, 1 April 2020 diff hist −209 Main Page update
25 March 2020
- 20:2220:22, 25 March 2020 diff hist −59 PHASER remove link to old article current
- 20:2220:22, 25 March 2020 diff hist −671 How to compile PHASER to run on multiple CPUs (Linux) remove text. current phaser _does_ already use multiple CPUs. no need to recompile current Tag: Blanking
24 March 2020
- 18:5918:59, 24 March 2020 diff hist −101 m Coot →Installation from a distributed binary tarball package
20 March 2020
- 20:3720:37, 20 March 2020 diff hist +10 Finding symmetry elements in P1 No edit summary current
- 20:3520:35, 20 March 2020 diff hist +26 Crystallography →Web services
20 February 2020
- 21:0621:06, 20 February 2020 diff hist −2,804 Computer hardware throw away the old stuff current
30 January 2020
- 20:3820:38, 30 January 2020 diff hist +179 SHELX C/D/E No edit summary
- 19:3719:37, 30 January 2020 diff hist +351 m SHELX C/D/E →How to find out if a molecular replacement solution is correct or wrong
8 January 2020
- 12:1912:19, 8 January 2020 diff hist −20 m Refinement →Wrong space group: fix link current
15 December 2019
- 18:0918:09, 15 December 2019 diff hist +1 m Wilson plot →relationship of Wilson B and Mean B factor: fix typos current
8 November 2019
- 17:2617:26, 8 November 2019 diff hist +6 Modifying the protein to crystallize better fix link current
20 October 2019
- 17:3517:35, 20 October 2019 diff hist −5 Stereo →Linux: "composite" "disable" no longer works - thx Mario!
29 July 2019
- 15:2915:29, 29 July 2019 diff hist +3 Phenix →TLS
- 10:2010:20, 29 July 2019 diff hist +50 Bruker software No edit summary current
- 10:1910:19, 29 July 2019 diff hist +29 N Bruker data Kay moved page Bruker data to Bruker software: fits better current Tag: New redirect
- 10:1910:19, 29 July 2019 diff hist 0 m Bruker software Kay moved page Bruker data to Bruker software: fits better
16 July 2019
- 15:1715:17, 16 July 2019 diff hist −164 Reflection files format →LCF current
- 10:3810:38, 16 July 2019 diff hist 0 Reflection files format →LCF
- 10:2110:21, 16 July 2019 diff hist +54 Reflection files format →LCF
- 09:4009:40, 16 July 2019 diff hist +205 Reflection files format →LCF: get ncol from header
- 09:3309:33, 16 July 2019 diff hist +431 Coot →Molprobity not active in COOT
15 July 2019
- 21:2821:28, 15 July 2019 diff hist +2 m Reflection files format →LCF
- 13:2713:27, 15 July 2019 diff hist +119 Reflection files format →LCF
- 12:1312:13, 15 July 2019 diff hist +72 Reflection files format →LCF
14 July 2019
- 21:4821:48, 14 July 2019 diff hist +13 Reflection files format →LCF
- 21:2921:29, 14 July 2019 diff hist +1,751 Reflection files format →LCF
2 July 2019
- 16:0416:04, 2 July 2019 diff hist +7,957 N Reflection files format Created page with "CCP4 reflection files are binary files that are usually read by routines from CCP4 libraries. However, sometimes one wants to read them with a different programming language o..."
9 May 2019
- 12:3212:32, 9 May 2019 diff hist +9 Phenix →Ligands
- 10:4010:40, 9 May 2019 diff hist +18 Bootable Linux USB stick No edit summary current
8 May 2019
- 12:3112:31, 8 May 2019 diff hist +581 Properties of proteins →Ideal metal bond distances current
1 April 2019
- 21:3121:31, 1 April 2019 diff hist +122 Phenix link to phenixBB added
- 21:2221:22, 1 April 2019 diff hist +639 Phenix →phenix.elbow - electronic Ligand Builder and Optimisation Workbench: according to phenixBB 1.4.2019
18 March 2019
- 10:4910:49, 18 March 2019 diff hist +119 Mapping sequence alignment to a structure update links and expand consurf info current
17 February 2019
- 17:1617:16, 17 February 2019 diff hist +47 Bootable Linux USB stick add "Linux on Macbook Pro" link
15 January 2019
- 10:4410:44, 15 January 2019 diff hist +467 Phenix →Occupancy
- 10:3810:38, 15 January 2019 diff hist +258 Phenix →Switching off specific interactions
7 January 2019
- 22:1622:16, 7 January 2019 diff hist +376 Stereo →Linux
- 22:1222:12, 7 January 2019 diff hist +38 Stereo →See also
11 December 2018
- 13:2113:21, 11 December 2018 diff hist +101 Bootable Linux USB stick No edit summary
2 December 2018
- 15:4415:44, 2 December 2018 diff hist +24 Phenix →Installation from source, and of Rosetta interface
- 15:1315:13, 2 December 2018 diff hist +17 Phenix →Installation from source, and of Rosetta interface
- 13:2213:22, 2 December 2018 diff hist −26 Phenix →Installation from source, and of Rosetta interface
30 November 2018
- 13:2313:23, 30 November 2018 diff hist +10 Stereo →Nvidia 3D Vision 2
19 August 2018
- 13:1613:16, 19 August 2018 diff hist +177 Bootable Linux USB stick update Mac setup quirks
18 August 2018
- 19:5719:57, 18 August 2018 diff hist +199 Bootable Linux USB stick No edit summary
23 July 2018
19 July 2018
- 15:0115:01, 19 July 2018 diff hist −12 Bootable Linux USB stick →USB sticks
16 July 2018
- 14:1214:12, 16 July 2018 diff hist +125 Bootable Linux USB stick Ubuntu
11 July 2018
- 13:1413:14, 11 July 2018 diff hist +1 Bootable Linux USB stick →generating images and copies of the stick
- 09:4709:47, 11 July 2018 diff hist +183 Servers for ligand topologies/parameters →How to generate topology/parameter files for unknown ligand current
8 July 2018
- 09:0709:07, 8 July 2018 diff hist +7 Crystallography →Slides showing the effect of resolution on electron density [http://www.ysbl.york.ac.uk/~emsley/coot/slides/reso-slides/]
- 09:0009:00, 8 July 2018 diff hist +30 Xtal computing No edit summary current
- 08:5708:57, 8 July 2018 diff hist +410 Servers for ligand topologies/parameters No edit summary
7 July 2018
- 18:0418:04, 7 July 2018 diff hist +3 Phenix →Hydrogens
- 16:5716:57, 7 July 2018 diff hist −1,334 Phenix →Refinement with mmtbx.lockit: remove
6 July 2018
- 13:4513:45, 6 July 2018 diff hist +11 Phenix →TLS
22 June 2018
- 21:2921:29, 22 June 2018 diff hist +276 Bootable Linux USB stick →install Fedora
- 20:5920:59, 22 June 2018 diff hist +55 Bootable Linux USB stick →install Fedora
- 20:5120:51, 22 June 2018 diff hist +156 Bootable Linux USB stick →install Fedora: mention APFS
- 20:4520:45, 22 June 2018 diff hist +23 Bootable Linux USB stick No edit summary
7 June 2018
- 21:0421:04, 7 June 2018 diff hist +45 Bootable Linux USB stick →Low-level formatting of (micro)SD cards
- 21:0221:02, 7 June 2018 diff hist +7 Bootable Linux USB stick →fill empty space of a partition with “zeroes”
25 May 2018
11 May 2018
- 14:3314:33, 11 May 2018 diff hist +205 SHELX C/D/E →References
- 14:2514:25, 11 May 2018 diff hist +919 SHELX C/D/E →Full list of SHELXE options (defaults in brackets): document the output of -x option
30 April 2018
- 08:4308:43, 30 April 2018 diff hist −4 Bootable Linux USB stick →generating images and copies of the stick
- 08:3908:39, 30 April 2018 diff hist +43 Bootable Linux USB stick →Install grub2 for BIOS boot (from chroot environment)
- 08:1108:11, 30 April 2018 diff hist −97 Bootable Linux USB stick →adjust the USB-stick for UEFI/EFI boot (before reboot from chroot environment)
- 08:0808:08, 30 April 2018 diff hist +1 Bootable Linux USB stick No edit summary
29 April 2018
- 15:0115:01, 29 April 2018 diff hist +70 Bootable Linux USB stick →How to create a bootabled GPT-partitioned USB-stick with Fedora
- 14:4414:44, 29 April 2018 diff hist +23 Bootable Linux USB stick →install Fedora on an UEFI machine (UEFI enabled ; LegacyBoot / CSM disabled)
- 14:4014:40, 29 April 2018 diff hist −23 Bootable Linux USB stick →How to create a bootabled GPT-partitioned USB-stick with Fedora
4 April 2018
- 15:0015:00, 4 April 2018 diff hist −39 Bootable Linux USB stick No edit summary
- 14:5314:53, 4 April 2018 diff hist +11 Bootable Linux USB stick →initializing the media
- 14:4814:48, 4 April 2018 diff hist −25 Bootable Linux USB stick →types of USB media
31 March 2018
- 11:3211:32, 31 March 2018 diff hist −5 CC1/2 No edit summary current
31 January 2018
24 January 2018
- 13:2113:21, 24 January 2018 diff hist −83 Phenix →NCS
23 January 2018
- 13:0713:07, 23 January 2018 diff hist +627 Bootable Linux USB stick →types of USB media
- 12:5212:52, 23 January 2018 diff hist −1 Bootable Linux USB stick →Install grub2 for BIOS boot (from chroot environment)
- 12:4412:44, 23 January 2018 diff hist −2 Bootable Linux USB stick →generating images and copies of the stick
- 12:4212:42, 23 January 2018 diff hist −1,010 Bootable Linux USB stick →Problems on old BIOS hardware
- 12:4212:42, 23 January 2018 diff hist 0 Bootable Linux USB stick →Hardware considerations
- 12:4012:40, 23 January 2018 diff hist −3 Bootable Linux USB stick →fill empty space of a partition with “zeroes”
- 12:3812:38, 23 January 2018 diff hist −51 Bootable Linux USB stick →fill empty space of a partition with “zeroes”
21 January 2018
- 22:5222:52, 21 January 2018 diff hist +262 Bootable Linux USB stick →Hardware considerations
- 18:3918:39, 21 January 2018 diff hist +61 Bootable Linux USB stick →Hardware considerations
- 16:1516:15, 21 January 2018 diff hist −11 Bootable Linux USB stick →USB stick: hardware considerations
- 16:1416:14, 21 January 2018 diff hist −88 Bootable Linux USB stick →USB stick: hardware considerations
- 16:0916:09, 21 January 2018 diff hist +16 Bootable Linux USB stick →types of USB media
20 January 2018
- 22:5022:50, 20 January 2018 diff hist +93 Bootable Linux USB stick →types of USB media
- 22:4822:48, 20 January 2018 diff hist +151 Bootable Linux USB stick →initializing the media
- 22:4522:45, 20 January 2018 diff hist +760 Bootable Linux USB stick →types of USB media
- 22:1922:19, 20 January 2018 diff hist −14 Bootable Linux USB stick →fill empty space of all partitions with “zeroes”
- 22:1422:14, 20 January 2018 diff hist +3,033 Bootable Linux USB stick →for techies: taking care of the stick
- 19:5419:54, 20 January 2018 diff hist +22 Bootable Linux USB stick →for techies: taking care of the stick
17 January 2018
- 22:4222:42, 17 January 2018 diff hist +78 Storage of diffraction data No edit summary current
- 22:3322:33, 17 January 2018 diff hist +137 Storage of diffraction data →Diffraction data storage solution
29 December 2017
- 11:2111:21, 29 December 2017 diff hist +127 Cryo →See also current
22 December 2017
- 16:0716:07, 22 December 2017 diff hist −119 Phenix No edit summary
- 16:0316:03, 22 December 2017 diff hist +28 Phenix fix links II
- 16:0116:01, 22 December 2017 diff hist +290 Phenix update links
- 15:4715:47, 22 December 2017 diff hist +33 Phenix No edit summary
- 15:4515:45, 22 December 2017 diff hist +1 Phenix →phenix.fmodel - calculate structure factors from model
18 December 2017
- 14:2714:27, 18 December 2017 diff hist +296 Crystallography →Web services
5 December 2017
- 13:3913:39, 5 December 2017 diff hist −218 Stereo →Nvidia 3D Vision 2
- 13:3813:38, 5 December 2017 diff hist +9 Stereo →Nvidia 3D Vision 2
- 13:2013:20, 5 December 2017 diff hist +53 Stereo →Nvidia 3D Vision 2
- 13:0813:08, 5 December 2017 diff hist +575 Stereo →Windows
23 November 2017
- 09:5209:52, 23 November 2017 diff hist −1 Bootable Linux USB stick No edit summary
22 November 2017
- 16:5216:52, 22 November 2017 diff hist +38 Bootable Linux USB stick No edit summary
- 16:2716:27, 22 November 2017 diff hist +1 Bootable Linux USB stick →adjust the USB-stick for UEFI/EFI boot (before reboot from chroot environment)
- 16:2616:26, 22 November 2017 diff hist +16 Bootable Linux USB stick →install Fedora23 on an UEFI machine (UEFI enabled ; LegacyBoot / CSM disabled)
- 16:2116:21, 22 November 2017 diff hist +22 Bootable Linux USB stick →install Fedora23 on an UEFI machine (UEFI enabled ; LegacyBoot / CSM disabled)
21 November 2017
- 11:5111:51, 21 November 2017 diff hist +108 Stereo →Software
13 October 2017
- 10:1810:18, 13 October 2017 diff hist +122 SMV file format add link to A. Arvai's SMV library current
7 October 2017
- 19:3219:32, 7 October 2017 diff hist +198 Refinement →Bulk solvent correction produces difference density
27 July 2017
- 11:1811:18, 27 July 2017 diff hist +754 Bioinformatics →Docking: Hydrophobic patches current
7 July 2017
- 22:0222:02, 7 July 2017 diff hist +260 R-factors →Data quality indicators
18 June 2017
- 23:0923:09, 18 June 2017 diff hist −3,419 User talk:MattB Blanked the page
28 May 2017
- 10:2310:23, 28 May 2017 diff hist +98 Phenix →Installation from source, and of Rosetta interface
22 May 2017
- 08:1808:18, 22 May 2017 diff hist −268 Phenix →Installation from source, and of Rosetta interface
1 May 2017
- 21:2321:23, 1 May 2017 diff hist −41 Programming and programming languages →Learning Fortran: remove dead link current
- 20:3420:34, 1 May 2017 diff hist +135 Programming and programming languages No edit summary
30 April 2017
- 20:0920:09, 30 April 2017 diff hist +89 Sharp →Hints for using SHARP current
- 20:0520:05, 30 April 2017 diff hist +267 Sharp →Hints for using SHARP: autoSHARP
27 April 2017
- 13:5313:53, 27 April 2017 diff hist −1 Crystallography courses on the web →Movies: fix link current
17 February 2017
- 20:5720:57, 17 February 2017 diff hist +1,230 Stereo →Linux
2 February 2017
- 15:1615:16, 2 February 2017 diff hist −1,945 Coot remove some obsolete stuff
28 December 2016
- 10:2010:20, 28 December 2016 diff hist +148 SHELX C/D/E hkl2map
28 November 2016
- 22:2322:23, 28 November 2016 diff hist −48 Filesystems →Ext4 current
- 22:2322:23, 28 November 2016 diff hist −46 Filesystems →Ext4
- 22:2222:22, 28 November 2016 diff hist −202 Filesystems →ZFS
- 22:2122:21, 28 November 2016 diff hist +45 Filesystems →XFS
21 November 2016
- 16:0916:09, 21 November 2016 diff hist −17 Bootable Linux USB stick →for techies: taking care of the stick
- 16:0016:00, 21 November 2016 diff hist +915 Bootable Linux USB stick →for techies: taking care of the stick
16 November 2016
- 14:3014:30, 16 November 2016 diff hist −78 Bootable Linux USB stick No edit summary
14 November 2016
- 17:4217:42, 14 November 2016 diff hist +87 Bootable Linux USB stick No edit summary
- 17:0117:01, 14 November 2016 diff hist +247 Bootable Linux USB stick No edit summary
- 12:2712:27, 14 November 2016 diff hist +142 Bootable Linux USB stick No edit summary
28 September 2016
- 21:2121:21, 28 September 2016 diff hist +1,751 CC1/2 No edit summary
26 July 2016
- 12:0112:01, 26 July 2016 diff hist +564 CC1/2 No edit summary
20 June 2016
- 22:0922:09, 20 June 2016 diff hist −25 Phenix →Using a reference model: upate syntax
29 May 2016
- 10:3110:31, 29 May 2016 diff hist +13 R-factors →what kinds of problems exist with these indicators?
- 10:2510:25, 29 May 2016 diff hist +361 R-factors →what kinds of problems exist with these indicators?
12 May 2016
- 10:1210:12, 12 May 2016 diff hist +90 Bootable Linux USB stick →install Fedora23 on an UEFI machine (UEFI enabled ; LegacyBoot / CSM disabled): add binutils RPM
23 April 2016
- 09:2809:28, 23 April 2016 diff hist +59 CC1/2 →References
- 09:2709:27, 23 April 2016 diff hist +762 N CC1/2 Created page with "Examples for citations from papers using (possibly among other criteria) CC<sub>1/2</sub> and/or the paired refinement method (reference below) for finding the high-resolution..."
21 April 2016
- 10:0010:00, 21 April 2016 diff hist +8 Test data sets No edit summary current
19 April 2016
- 16:2816:28, 19 April 2016 diff hist +181 Bootable Linux USB stick →install Fedora23 on an UEFI machine (UEFI enabled ; LegacyBoot / CSM disabled)
9 April 2016
- 14:1214:12, 9 April 2016 diff hist +151 Topology plots No edit summary current
30 March 2016
- 10:3210:32, 30 March 2016 diff hist +1,130 Bootable Linux USB stick No edit summary
- 10:0210:02, 30 March 2016 diff hist +1 Bootable Linux USB stick →for techies: taking care of the stick
29 March 2016
- 15:2515:25, 29 March 2016 diff hist +14 Bootable Linux USB stick →for techies: taking care of the stick
- 15:1415:14, 29 March 2016 diff hist −486 Bootable Linux USB stick →for techies: taking care of the stick
- 14:1414:14, 29 March 2016 diff hist +33 Bootable Linux USB stick →for techies: taking care of the stick
28 March 2016
- 10:5410:54, 28 March 2016 diff hist +99 Bootable Linux USB stick →for techies: taking care of the stick
- 10:5010:50, 28 March 2016 diff hist +91 Bootable Linux USB stick →for techies: taking care of the stick
26 March 2016
- 16:3316:33, 26 March 2016 diff hist +233 Bootable Linux USB stick →for techies: taking care of the stick
- 16:2916:29, 26 March 2016 diff hist +13 Bootable Linux USB stick →GPT partition the stick using gdisk
- 16:2016:20, 26 March 2016 diff hist +43 Bootable Linux USB stick →for techies: taking care of the stick
- 16:1716:17, 26 March 2016 diff hist +1,157 Bootable Linux USB stick →generating images and copies of the stick
25 March 2016
- 18:2318:23, 25 March 2016 diff hist −229 Bootable Linux USB stick No edit summary
- 18:2118:21, 25 March 2016 diff hist −6 Bootable Linux USB stick →generating images and copies of the stick
- 18:1618:16, 25 March 2016 diff hist +83 Bootable Linux USB stick No edit summary
- 18:1418:14, 25 March 2016 diff hist −244 Bootable Linux USB stick No edit summary
- 17:5917:59, 25 March 2016 diff hist −379 Bootable Linux USB stick No edit summary
22 March 2016
- 22:0322:03, 22 March 2016 diff hist −6 Bootable Linux USB stick →Install Fedora23 on an UEFI machine (UEFI enabled; LegacyBoot / CSM disabled)
- 22:0322:03, 22 March 2016 diff hist +13 Bootable Linux USB stick →GPT partition the stick using gdisk
- 21:5921:59, 22 March 2016 diff hist +118 Bootable Linux USB stick →Howto create a bootabled GPT-partitioned USB-stick with Fedora 23
- 18:0018:00, 22 March 2016 diff hist +258 Bootable Linux USB stick No edit summary
- 10:2010:20, 22 March 2016 diff hist +3,621 Bootable Linux USB stick update with complete writeup
13 March 2016
- 00:2000:20, 13 March 2016 diff hist 0 Current events No edit summary current
- 00:2000:20, 13 March 2016 diff hist −2,108 Course or Conference 2 Blanked the page current
- 00:1900:19, 13 March 2016 diff hist −1,889 Course or Conference 1 Blanked the page current
- 00:1900:19, 13 March 2016 diff hist +224 Current events No edit summary
- 00:1400:14, 13 March 2016 diff hist +131 Bootable Linux USB stick No edit summary
- 00:0800:08, 13 March 2016 diff hist −33 Bootable Linux USB stick →Some more details
8 March 2016
- 18:1018:10, 8 March 2016 diff hist −321 CentOS No edit summary current
26 October 2015
- 10:5210:52, 26 October 2015 diff hist −40 CentOS →Installation and maintenance of CentOS machines
21 October 2015
- 18:1818:18, 21 October 2015 diff hist −221 Filesystems →Ext3: remove
- 18:1818:18, 21 October 2015 diff hist +39 Filesystems →XFS
13 October 2015
- 17:2217:22, 13 October 2015 diff hist +94 Phenix →NCS
9 September 2015
- 10:5410:54, 9 September 2015 diff hist +618 Crystal growth: Protein-DNA complexes No edit summary current
31 July 2015
- 11:5311:53, 31 July 2015 diff hist +62 Main Page No edit summary
30 July 2015
- 08:3808:38, 30 July 2015 diff hist +28 Crystals →Crystal Imperfections
- 08:3708:37, 30 July 2015 diff hist +74 N Examples of diffraction patterns Kay moved page Examples of diffraction patterns to Examples of diffraction patterns showing particular features: makes more sense current
- 08:3708:37, 30 July 2015 diff hist 0 m Examples of diffraction patterns showing particular features Kay moved page Examples of diffraction patterns to Examples of diffraction patterns showing particular features: makes more sense current
29 July 2015
- 08:1408:14, 29 July 2015 diff hist +43 Examples of diffraction patterns showing particular features No edit summary
- 08:0708:07, 29 July 2015 diff hist +72 N File:212490 rescale.jpg From https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=CCP4BB;38a82a0b.1507 current
- 08:0608:06, 29 July 2015 diff hist +72 N File:212488 rescale.jpg From https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=CCP4BB;38a82a0b.1507 current
- 08:0408:04, 29 July 2015 diff hist +81 Examples of diffraction patterns showing particular features No edit summary
- 08:0308:03, 29 July 2015 diff hist +658 N Examples of diffraction patterns showing particular features Created page with " This pattern arises from disorder caused by "frustrated overconstraint". You can find similar pattern in Welberry, T. R., et al. "Diffuse scattering resulting from macromol..."
- 08:0008:00, 29 July 2015 diff hist +39 Crystals →Crystal Imperfections
- 07:5807:58, 29 July 2015 diff hist +80 Basics of Crystallography No edit summary current
21 July 2015
- 22:2022:20, 21 July 2015 diff hist +280 Bulk solvent correction No edit summary current
11 July 2015
- 09:3009:30, 11 July 2015 diff hist +1,065 Coot →make RSR in coot 0.8.1 behave like in earlier versions: Molprobity not active in COOT
25 June 2015
- 12:1212:12, 25 June 2015 diff hist +23 SHELX C/D/E →Obtaining the SHELX programs: update URL
- 12:0912:09, 25 June 2015 diff hist −265 SHELX C/D/E →Obtaining the SHELX programs: remove text about beta
- 12:0812:08, 25 June 2015 diff hist −5 SHELX C/D/E →SAD/MAD with automatic backbone building: no beta version req'd
- 11:5811:58, 25 June 2015 diff hist −127 SHELX C/D/E →Full list of SHELXE options (defaults in brackets)
10 June 2015
- 19:5419:54, 10 June 2015 diff hist +1,160 Zalman Stereo →Zalman LCD Stereo current
30 May 2015
- 20:4520:45, 30 May 2015 diff hist +122 Phenix →advanced usage
29 May 2015
- 14:4614:46, 29 May 2015 diff hist −122 Phenix →phaser.brunett
29 April 2015
- 10:1710:17, 29 April 2015 diff hist −65 Phenix →phenix.polygon
22 April 2015
- 12:2712:27, 22 April 2015 diff hist +76 Phenix →Atom selection
4 April 2015
- 10:5010:50, 4 April 2015 diff hist +328 Stereo →Nvidia 3D Vision 2
1 April 2015
- 22:2922:29, 1 April 2015 diff hist −128 Stereo →Nvidia 3D Vision 2
31 March 2015
- 21:4121:41, 31 March 2015 diff hist +64 Stereo →Nvidia 3D Vision 2
29 March 2015
- 12:5812:58, 29 March 2015 diff hist +1,072 Coot →NCS Rotamer differences
26 March 2015
- 00:1000:10, 26 March 2015 diff hist −172 Stereo →Nvidia 3D Vision 2
25 March 2015
- 10:5210:52, 25 March 2015 diff hist +32 Stereo →Nvidia 3D Vision 2
24 March 2015
- 16:4216:42, 24 March 2015 diff hist −6 Stereo →Nvidia 3D Vision 2
- 16:3816:38, 24 March 2015 diff hist +140 Stereo →Nvidia 3D Vision 2
- 16:2716:27, 24 March 2015 diff hist +38 Stereo →Nvidia 3D Vision 2
- 16:2216:22, 24 March 2015 diff hist +14 Stereo →Nvidia 3D Vision 2
- 16:1816:18, 24 March 2015 diff hist +325 Stereo No edit summary
19 March 2015
- 09:5209:52, 19 March 2015 diff hist +75 Phenix →Installation from source, and of Rosetta interface
18 March 2015
- 20:5320:53, 18 March 2015 diff hist +1,841 Phenix Installation from source, and of Rosetta interface
- 12:2012:20, 18 March 2015 diff hist −10 R-factors →what kinds of problems exist with these indicators?: fix link
24 January 2015
- 12:4812:48, 24 January 2015 diff hist +1,538 Phenix →Crystallographic data
21 January 2015
- 05:0205:02, 21 January 2015 diff hist −44 Stereo →See also
- 04:5904:59, 21 January 2015 diff hist +20 Stereo No edit summary
- 03:3103:31, 21 January 2015 diff hist −1,678 Stereo No edit summary
- 03:2503:25, 21 January 2015 diff hist +2 Stereo →See also
- 03:2503:25, 21 January 2015 diff hist +27 N Coot zalman Kay moved page Coot zalman to Zalman Stereo: more fitting current
- 03:2503:25, 21 January 2015 diff hist 0 m Zalman Stereo Kay moved page Coot zalman to Zalman Stereo: more fitting
- 03:2403:24, 21 January 2015 diff hist −9 Zalman Stereo No edit summary
20 January 2015
- 12:3112:31, 20 January 2015 diff hist +7 Stereo No edit summary
- 11:4111:41, 20 January 2015 diff hist +38 Stereo →Status January 2015
- 11:4011:40, 20 January 2015 diff hist −45 Stereo →Nvidia 3D Vision 2
- 11:3511:35, 20 January 2015 diff hist +178 Stereo →TFT monitors: update January 2015
- 11:2211:22, 20 January 2015 diff hist +4 Stereo →Nvidia 3D Vision 2
- 11:0511:05, 20 January 2015 diff hist 0 Stereo →Nvidia 3D Vision
- 11:0411:04, 20 January 2015 diff hist +358 Stereo →Nvidia 3D Vision
- 10:4910:49, 20 January 2015 diff hist −1,049 Stereo No edit summary
- 10:2310:23, 20 January 2015 diff hist +62 Stereo →TFT monitors: update January 2015
- 09:5509:55, 20 January 2015 diff hist −728 Zalman Stereo →Some Potentially Useful Scripts and Tweaks
- 09:5409:54, 20 January 2015 diff hist −481 Zalman Stereo →Customized Menu for Zalman Monitor
- 09:5309:53, 20 January 2015 diff hist −679 Zalman Stereo →Invoking Zalman Stereo mode in COOT
- 09:5209:52, 20 January 2015 diff hist −363 Zalman Stereo →Customized Key Bindings to Toggle Stereo on and Off
- 09:5209:52, 20 January 2015 diff hist −136 Zalman Stereo →Inverted Stereo?
- 09:2809:28, 20 January 2015 diff hist +869 Stereo Stereo in 2015
18 January 2015
- 05:0205:02, 18 January 2015 diff hist +195 Phenix →phenix.pbdtools - PDB model manipulations and statistics
- 04:5604:56, 18 January 2015 diff hist +176 Phenix →Atom selection
17 January 2015
18 December 2014
- 11:2311:23, 18 December 2014 diff hist +17 Create an account No edit summary current
10 December 2014
- 12:1712:17, 10 December 2014 diff hist +10 Phenix →phenix.fmodel - calculate structure factors from model
- 11:1411:14, 10 December 2014 diff hist +40 Phenix →NCS
31 October 2014
- 23:2423:24, 31 October 2014 diff hist −163 Main Page →How to use this wiki: prove you're a human
14 October 2014
- 13:2413:24, 14 October 2014 diff hist −5 R-factors →what kinds of problems exist with these indicators?
- 13:2313:23, 14 October 2014 diff hist +2 R-factors →measuring quality of averaged intensities/amplitudes
- 12:2912:29, 14 October 2014 diff hist −10 R-factors →Model quality indicators
- 12:2712:27, 14 October 2014 diff hist −52 R-factors R_scale
- 12:2112:21, 14 October 2014 diff hist +49 R-factors →Comparing two sets of structure factor amplitudes or intensities
- 11:0311:03, 14 October 2014 diff hist +291 R-factors →measuring quality of averaged intensities/amplitudes
- 09:5009:50, 14 October 2014 diff hist +4 R-factors No edit summary
- 09:4709:47, 14 October 2014 diff hist +165 R-factors No edit summary
6 October 2014
- 18:1718:17, 6 October 2014 diff hist +144 Finding symmetry elements in P1 No edit summary
27 July 2014
- 14:5814:58, 27 July 2014 diff hist +146 Crystals →Crystal Growth
7 May 2014
- 12:1612:16, 7 May 2014 diff hist +341 Coot →NCS edits
3 May 2014
- 10:2910:29, 3 May 2014 diff hist +76 CIF files →Use the Grade server
- 09:3409:34, 3 May 2014 diff hist +51 CIF files →Use the PRODRG server
- 09:3109:31, 3 May 2014 diff hist +1,026 N CIF files Created page with "CIF files are needed for refinement (e.g. refmac, phenix.refine, buster) and visualization programs (e.g. coot) to describe the topology and parameters of liga..."
18 April 2014
- 18:0618:06, 18 April 2014 diff hist +56 Refinement →Bulk solvent correction produces difference density
4 April 2014
- 13:0313:03, 4 April 2014 diff hist −183 SHELX C/D/E →Cubic space groups (PATS vs WEED): remove paragraph - WEED is no longer necessary in latest SHELXE
- 11:3511:35, 4 April 2014 diff hist +766 SHELX C/D/E →critical parameters: re-organize
31 March 2014
- 14:3314:33, 31 March 2014 diff hist −111 Coot update URLs at top of article
26 March 2014
- 23:4223:42, 26 March 2014 diff hist +44 SHELX C/D/E →critical parameters: reason to use MIND -3.5
21 March 2014
19 March 2014
- 12:2112:21, 19 March 2014 diff hist +396 SHELX C/D/E →critical parameters
18 March 2014
- 09:0109:01, 18 March 2014 diff hist −6 Hkl2map update download site current
- 08:5508:55, 18 March 2014 diff hist −20 m SHELX C/D/E →SHELXC: remove duplicate SPAG
10 March 2014
- 15:0215:02, 10 March 2014 diff hist +14,444 Phenix new: List of programs
5 March 2014
- 15:3015:30, 5 March 2014 diff hist +144 SHELX C/D/E No edit summary
- 15:2515:25, 5 March 2014 diff hist 0 SHELX C/D/E →how to find out if a molecular replacement solution is correct or wrong
- 15:2415:24, 5 March 2014 diff hist −4 SHELX C/D/E →The free lunch algorithm (FLA): no longer new
- 15:2315:23, 5 March 2014 diff hist +264 SHELX C/D/E →RIP with SHELXC/D/E
- 15:2215:22, 5 March 2014 diff hist −279 SHELX C/D/E remove
- 15:2115:21, 5 March 2014 diff hist +165 SHELX C/D/E →Phasing and density modification
- 15:2015:20, 5 March 2014 diff hist −1,051 SHELX C/D/E RIP
- 15:1815:18, 5 March 2014 diff hist +3,550 SHELX C/D/E usage notes and options as written out by SHELXE Version 2014/1
- 14:3414:34, 5 March 2014 diff hist +1,355 SHELX C/D/E shelxc: insert usage notes as written out by the program
- 12:0912:09, 5 March 2014 diff hist +32 SHELX C/D/E →SHELXC: xds files are also read
2 February 2014
- 22:4322:43, 2 February 2014 diff hist +282 R-factors →what kinds of problems exist with these indicators?
23 January 2014
- 12:5312:53, 23 January 2014 diff hist +286 Coot →Zalman Stereo
11 January 2014
- 13:0813:08, 11 January 2014 diff hist +42 Phenix →phenix.explore_metric_symmetry - investigate different settings: link to othercell doc
22 November 2013
- 11:4411:44, 22 November 2013 diff hist +329 Stereo →Stereo on TFT monitors
- 11:3611:36, 22 November 2013 diff hist +579 Stereo →Stereo on TFT monitors
11 November 2013
- 11:2911:29, 11 November 2013 diff hist +368 Properties of proteins →Distinguishing ions from waters
- 11:1911:19, 11 November 2013 diff hist −53 Properties of proteins →Melting point
31 October 2013
- 15:1515:15, 31 October 2013 diff hist +235 Twinning →Refinement
11 September 2013
- 16:4316:43, 11 September 2013 diff hist +620 Stereo →Stereo on TFT monitors
1 May 2013
- 21:3821:38, 1 May 2013 diff hist +340 Phenix →Validation
12 March 2013
- 23:2823:28, 12 March 2013 diff hist −68 Topology plots No edit summary
- 23:2523:25, 12 March 2013 diff hist +515 N Topology plots collect results from thread https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ccp4bb;950acc9c.1303
- 23:1423:14, 12 March 2013 diff hist +21 Bioinformatics →Structure only: topology plots
17 February 2013
- 02:2802:28, 17 February 2013 diff hist +100 Phenix →TLS
20 January 2013
14 January 2013
- 12:1912:19, 14 January 2013 diff hist +9 SHELX C/D/E →notes about the beta-test version of SHELXE
- 12:1712:17, 14 January 2013 diff hist +143 SHELX C/D/E →notes about the beta-test version of SHELXE
18 November 2012
- 12:5112:51, 18 November 2012 diff hist +272 Phenix phenix.pdb_atom_selection
14 November 2012
- 11:2211:22, 14 November 2012 diff hist +131 Solve a small-molecule structure →assigning chemical types
13 November 2012
- 13:1813:18, 13 November 2012 diff hist +472 Solve a small-molecule structure →assigning chemical types
- 13:0413:04, 13 November 2012 diff hist +6 Solve a small-molecule structure →use POINTLESS to find possible spacegroups
- 13:0213:02, 13 November 2012 diff hist −318 Solve a small-molecule structure →use XPREP to find possible spacegroups
3 August 2012
- 15:1615:16, 3 August 2012 diff hist +385 Phenix →An experimental feature currently being worked on
5 July 2012
- 08:2508:25, 5 July 2012 diff hist +534 Phenix →TLS
- 08:2508:25, 5 July 2012 diff hist −195 Phenix →advanced usage
15 June 2012
- 22:0022:00, 15 June 2012 diff hist +269 R-factors →what kinds of problems exist with these indicators?
7 June 2012
- 10:3410:34, 7 June 2012 diff hist +157 R-factors →what kinds of problems exist with these indicators?: include table from Murshudov paper
25 May 2012
- 08:5708:57, 25 May 2012 diff hist +450 Coot reading MTZ file with experimental PHI and FOM using --auto
23 May 2012
- 09:3209:32, 23 May 2012 diff hist +510 N Crystallographic data file formats Created page with " == MAR == A MarCCD file is a TIFF image. The first 4096 bytes contain the header in a simple format, where the crystallographically interesting stuff starts after byte 1024...." current
- 09:2809:28, 23 May 2012 diff hist +57 SMV file format No edit summary
14 May 2012
- 21:4321:43, 14 May 2012 diff hist +186 Twinning →Refinement
7 May 2012
- 08:2208:22, 7 May 2012 diff hist +337 Coot →SHELXL
5 May 2012
- 09:3109:31, 5 May 2012 diff hist +866 Properties of proteins CSO CSX
3 May 2012
- 21:3521:35, 3 May 2012 diff hist +247 Phenix phenix.ksdssp
16 April 2012
- 17:5417:54, 16 April 2012 diff hist +11 Phenix →advanced usage: new nomenclature: optimize_xyz_weight=true optimize_adp_weight=true
30 March 2012
- 13:4513:45, 30 March 2012 diff hist +56 Coot →Example: installing a 64bit nightly CentOS5 binary build on 64bit SL6.1: fix typo
24 March 2012
- 10:4510:45, 24 March 2012 diff hist +1,684 Pseudo-translation No edit summary current
- 10:3110:31, 24 March 2012 diff hist +641 N Pseudo-translation Created page with "* R-values of a structure with pseudo-translation are higher than usual, e.g. starting R values after molecular replacement could be 70-80%. == Solving the structure == # obt..."
- 10:2410:24, 24 March 2012 diff hist +24 Intensity statistics No edit summary current
- 10:2310:23, 24 March 2012 diff hist +4 R-factors →what kinds of problems exist with these indicators?
23 March 2012
- 10:3310:33, 23 March 2012 diff hist +67 Phenix →phenix.clashscore
21 March 2012
- 16:5716:57, 21 March 2012 diff hist +174 Phenix →phenix.apply_ncs - applying NCS to a molecule to generate all NCS copies
20 March 2012
- 09:1609:16, 20 March 2012 diff hist +132 Phenix →NCS
16 March 2012
- 13:1113:11, 16 March 2012 diff hist +499 Coot building loops
13 March 2012
- 09:3609:36, 13 March 2012 diff hist +655 N Solvent content Created page with "Solvent content can be calculated with the CCP4 program matthews_coef, or with a [http://www.ruppweb.org/Mattprob/ Web server]. Usual values are around 50%, but the range is f..." current
- 09:2309:23, 13 March 2012 diff hist +21 Crystals solvent content
11 March 2012
- 17:1117:11, 11 March 2012 diff hist +185 R-factors →what kinds of problems exist with these indicators?
4 March 2012
- 17:5017:50, 4 March 2012 diff hist −24 CentOS No edit summary
- 17:5017:50, 4 March 2012 diff hist +327 CentOS No edit summary
- 17:4117:41, 4 March 2012 diff hist +333 CentOS No edit summary
3 March 2012
- 09:4909:49, 3 March 2012 diff hist +252 R-factors →what kinds of problems exist with these indicators?
11 February 2012
- 20:4720:47, 11 February 2012 diff hist +361 Coot →Example: installing a 64bit nightly CentOS5 binary build on 64bit SL6.1
- 20:3920:39, 11 February 2012 diff hist −6,076 Coot shorter and more accurate
- 13:1813:18, 11 February 2012 diff hist +105 Coot →Example: installing a 64bit nightly CentOS5 binary build on 64bit SL6.1
- 13:1513:15, 11 February 2012 diff hist +1,909 Coot →Example: installing coot-0.7-pre-1-revision-3999-binary-Linux-x86_64-centos-5-python-gtk2.tar.gz on 64bit SL6.1
- 12:1312:13, 11 February 2012 diff hist +6,859 Coot →Installation from a distributed binary tarball package
26 January 2012
- 22:1322:13, 26 January 2012 diff hist +2,041 Phenix →Low resolution refinement
- 22:0522:05, 26 January 2012 diff hist +250 Programming and programming languages →Learning Python
- 15:2915:29, 26 January 2012 diff hist −1 SHELX C/D/E →SAD/MAD with automatic backbone building
21 January 2012
- 14:1914:19, 21 January 2012 diff hist +730 N Ligand display Created page with "* [http://www.ebi.ac.uk/thornton-srv/software/LIGPLOT/ Ligplot] - You don't need any skills to use Ligplot. Only thing you have to give is the "residue number" of the ligand or ..." current
- 14:1414:14, 21 January 2012 diff hist +21 Bioinformatics →Structure only
12 January 2012
- 09:5509:55, 12 January 2012 diff hist +75 Experimental phasing →Heavy atoms and their properties current
14 December 2011
1 December 2011
- 22:1222:12, 1 December 2011 diff hist +587 N Solving a structure: Tips and Tricks Created page with "One possible way of improving "weak density" is to improve the model as much as you can: make sure you modeled all alternative conformations, all solvent, etc. * B-factor sharpen..." current
- 22:0322:03, 1 December 2011 diff hist +241 Main Page →News
- 22:0222:02, 1 December 2011 diff hist −105 Main Page →How to use this wiki
- 14:4114:41, 1 December 2011 diff hist +230 Solve a small-molecule structure →Electron density
11 November 2011
- 16:2516:25, 11 November 2011 diff hist +170 Phenix →Validation: phenix.r_factor_statistics
8 November 2011
- 10:4010:40, 8 November 2011 diff hist +883 Solve a small-molecule structure →Solve the structure with SHELXD: add GS posting
5 November 2011
- 10:4910:49, 5 November 2011 diff hist +10 SHELX C/D/E →how to prove that a molecular replacement solution is correct
- 10:4910:49, 5 November 2011 diff hist +1,531 SHELX C/D/E →notes about the beta-test version of SHELXE
22 October 2011
- 08:1808:18, 22 October 2011 diff hist +217 Improving crystal quality →Working with poor quality crystals: reference current
9 October 2011
- 10:2210:22, 9 October 2011 diff hist +153 m Phenix →Atom selection: add example
1 October 2011
- 21:0621:06, 1 October 2011 diff hist +4 Centric and acentric reflections →Reciprocal space
- 21:0521:05, 1 October 2011 diff hist +201 Centric and acentric reflections →References
- 21:0321:03, 1 October 2011 diff hist 0 Centric and acentric reflections →Reciprocal space
27 September 2011
- 21:2121:21, 27 September 2011 diff hist +1 m Main Page →How to use this wiki: type
- 21:2021:20, 27 September 2011 diff hist +100 Main Page →How to use this wiki
- 08:4908:49, 27 September 2011 diff hist +683 Phenix →An experimental feature currently being worked on
- 08:2208:22, 27 September 2011 diff hist +14 Phenix →phenix.grow_density - local density improvement
24 September 2011
- 13:4913:49, 24 September 2011 diff hist +88 SHELX C/D/E →SHELXC
- 13:4613:46, 24 September 2011 diff hist +497 SHELX C/D/E →Obtaining the SHELX programs
- 13:0913:09, 24 September 2011 diff hist 0 SHELX C/D/E →Obtaining the SHELX programs
14 September 2011
- 09:2609:26, 14 September 2011 diff hist +48 Refinement →Programs
12 September 2011
- 10:3910:39, 12 September 2011 diff hist +186 Visualization: graphics cards and 3D →Hybrid graphics current
- 10:3710:37, 12 September 2011 diff hist +676 Visualization: graphics cards and 3D →maintaining the NVidia driver
8 September 2011
- 14:5814:58, 8 September 2011 diff hist +64 Main Page →What is CCP4?
1 September 2011
30 August 2011
- 09:3409:34, 30 August 2011 diff hist +270 Molecular replacement →Self-rotation function current
11 August 2011
- 20:4720:47, 11 August 2011 diff hist +520 Phenix →phenix.grow_density - local density improvement
7 August 2011
- 21:4821:48, 7 August 2011 diff hist +17 Phenix →Using a reference model
- 19:5019:50, 7 August 2011 diff hist +513 Phenix →Fix His/Asn/Gln sidechain orientations
6 August 2011
- 08:3508:35, 6 August 2011 diff hist +243 Phenix →phenix.tls - tool to convert between total and residual ADPs
22 July 2011
- 21:2521:25, 22 July 2011 diff hist +122 Phenix →phenix.automr - interface to Phaser and Resolve: brunett
- 19:5819:58, 22 July 2011 diff hist +194 Phenix →phenix.find_tls_groups: data_viewer
11 July 2011
- 21:0121:01, 11 July 2011 diff hist +113 Phenix →phenix.apply_ncs - applying NCS to a molecule to generate all NCS copies
- 21:0021:00, 11 July 2011 diff hist +119 Phenix →phenix.find_ncs - identification of NCS operators
- 14:4714:47, 11 July 2011 diff hist +142 Main Page →How to use this wiki
10 June 2011
- 19:2419:24, 10 June 2011 diff hist +53 Bioinformatics →Docking
1 June 2011
- 17:0917:09, 1 June 2011 diff hist +105 Phenix →TLS
29 May 2011
- 18:4118:41, 29 May 2011 diff hist +119 Structural superposition No edit summary current
- 18:3218:32, 29 May 2011 diff hist +98 Structural superposition No edit summary
27 May 2011
- 08:2408:24, 27 May 2011 diff hist +700 Refinement →Bulk solvent correction produces difference density
19 May 2011
- 09:3809:38, 19 May 2011 diff hist +745 Phenix →phenix.mtz2map
16 May 2011
- 21:5121:51, 16 May 2011 diff hist +191 Twinning →Solution
14 May 2011
- 17:1817:18, 14 May 2011 diff hist +314 Twinning No edit summary
- 17:0717:07, 14 May 2011 diff hist +95 Twinning →Twinning by Merohedry
10 May 2011
- 12:4212:42, 10 May 2011 diff hist +344 Prediction of structure from sequence: servers and programs →3D prediction current
2 May 2011
- 12:1912:19, 2 May 2011 diff hist +493 Phenix →phenix.phaser
1 May 2011
15 April 2011
- 10:5610:56, 15 April 2011 diff hist +704 Structural superposition No edit summary
- 08:5108:51, 15 April 2011 diff hist +38 N Superimposing Molecules moved Superimposing Molecules to Structural superposition: seems better current
- 08:5108:51, 15 April 2011 diff hist 0 m Structural superposition moved Superimposing Molecules to Structural superposition: seems better
- 08:5008:50, 15 April 2011 diff hist +88 Bioinformatics →Structure only
- 08:4708:47, 15 April 2011 diff hist +588 N Structural superposition Created page with "# MatchMaker - http://www.cgl.ucsf.edu/chimera/current/docs/ContributedSoftware/matchmaker/matchmaker.html which is part of Chimera http://www.cgl.ucsf.edu/chimera # O # lsqman ..."
7 April 2011
- 09:0709:07, 7 April 2011 diff hist +109 Phenix →An experimental feature currently being worked on
- 09:0409:04, 7 April 2011 diff hist +202 Phenix →Switching off specific interactions
- 08:3208:32, 7 April 2011 diff hist 0 File:Cxc-motif.jpg uploaded a new version of "File:Cxc-motif.jpg" current
- 08:3108:31, 7 April 2011 diff hist +63 Structural motifs in the PDB No edit summary current
- 08:3008:30, 7 April 2011 diff hist −27 Structural motifs in the PDB No edit summary
- 08:2608:26, 7 April 2011 diff hist 0 N File:Cxc-motif.jpg No edit summary
6 April 2011
- 22:0122:01, 6 April 2011 diff hist +2,484 N Structural motifs in the PDB Created page with "'''Question''': Has anyone see a disulfide forming between the two cys of "CXC" in the middle of a loop, and create a sharp turn, where X is not a proline? I seems to me that geo..."
- 21:5421:54, 6 April 2011 diff hist +35 Bioinformatics →Structure to Sequence
- 08:4708:47, 6 April 2011 diff hist +1,228 Data collection: Tips and Tricks No edit summary current
22 March 2011
9 March 2011
- 10:5110:51, 9 March 2011 diff hist +27 Bioinformatics →Structure only
- 10:4810:48, 9 March 2011 diff hist +184 Morph with Chimera No edit summary current
7 March 2011
- 10:2210:22, 7 March 2011 diff hist +565 Solve a small-molecule structure →Finishing the structure
1 March 2011
- 21:3221:32, 1 March 2011 diff hist +437 Solve a small-molecule structure No edit summary
- 17:2817:28, 1 March 2011 diff hist +39 Solve a small-molecule structure →use XPREP to find possible spacegroups
- 16:2816:28, 1 March 2011 diff hist +565 Solve a small-molecule structure No edit summary
- 16:1816:18, 1 March 2011 diff hist +3,027 Solve a small-molecule structure No edit summary
- 15:4115:41, 1 March 2011 diff hist +57 Solve a small-molecule structure →assigning chemical types
- 15:3215:32, 1 March 2011 diff hist −1,335 Solve a small-molecule structure No edit summary
- 13:1113:11, 1 March 2011 diff hist +121 Solve a small-molecule structure →reduce the data with your favourite data processing software
- 13:0813:08, 1 March 2011 diff hist +284 Solve a small-molecule structure →Finishing the structure
- 13:0413:04, 1 March 2011 diff hist 0 N File:Diffden.png No edit summary current
- 12:4312:43, 1 March 2011 diff hist +210 Zalman Stereo →Inverted Stereo?
28 February 2011
- 23:1823:18, 28 February 2011 diff hist +442 Solve a small-molecule structure No edit summary
- 23:0623:06, 28 February 2011 diff hist +1,611 Solve a small-molecule structure No edit summary
- 22:5222:52, 28 February 2011 diff hist +2,097 Solve a small-molecule structure No edit summary
- 21:0221:02, 28 February 2011 diff hist +5,533 N Solve a small-molecule structure Created page with "The following is based on the experience of a protein crystallographer who one day obtained a small-molecule dataset and managed to solve and refine it without prior knowledge wh..."
- 19:2419:24, 28 February 2011 diff hist −2 Crystallography No edit summary
- 19:2219:22, 28 February 2011 diff hist +59 Crystallography No edit summary
- 12:1712:17, 28 February 2011 diff hist +152 Zalman Stereo →Inverted Stereo?